Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g0375 ATGGGATTGCCGGATTATGCTTCAATCCTGATTGTAGCAGCATTAATAGCTGCACTTTTATTCTTCAGCCTCACCATGCTTGGTTGGTGCACCTACAGAAGTATTGATCTAATACAATCCATTCCACCCACAACAACAATAAACTCAGCTCTTGATGACAAGTTCCAATCCTTCACCACGAGCCTAGAGTCTCATTCCAAGACATTTCAGTTCAGAGCTGCAGAAGCTGTACCAGGCACTGATCAGACTGAATGCATCATCTGTTTGGCACCCTTTGAAGAAGAAGACAGTGTCAGGCAGCTTCATAGCTGCAAACACATCTTTCATACGATTTGCATCGATACTTGGCTCGCCTCTCAATCTGGCTGCCCTTTGTGTAGAACCCAAATAGACCTTGTGCCACCTTCTCCGAATGAGATTGAGGAAGTGTCCCTTCCAAGAAGATCTGTGGCTTCAGAGGAAAATGGCGACAATCAAATTATCTTGTTCCTTGTCAGCTCCTGA 504 0.4484 MGLPDYASILIVAALIAALLFFSLTMLGWCTYRSIDLIQSIPPTTTINSALDDKFQSFTTSLESHSKTFQFRAAEAVPGTDQTECIICLAPFEEEDSVRQLHSCKHIFHTICIDTWLASQSGCPLCRTQIDLVPPSPNEIEEVSLPRRSVASEENGDNQIILFLVSS 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g0375 167 Pfam Ring finger domain 84 127 IPR001841 -
Lele44g0375 167 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 5 132 - -
Lele44g0375 167 SMART ring_2 85 126 IPR001841 -
Lele44g0375 167 ProSiteProfiles Zinc finger RING-type profile. 85 127 IPR001841 -
Lele44g0375 167 SUPERFAMILY RING/U-box 84 135 - -
Lele44g0375 167 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 47 132 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g0375 Lele-ChrLele44 2752120 2752623 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g0375 68 139 C3H Transcription Factor Family AT2G42360 45.333 3.43e-17 74.3