Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g0374 ATGTTTTGTAGTATGGACGTGGAGCAAGTTTCAAGTTTCGTGGTTTTGTATACTGGAGGTGCATGTGAATTTTCCATGGAGATGTTGGTTGGAATTGAGGATAATGACGAGGGGAAGCTTGAAGACAGTGGGGTTGATAGAAGTAGCTCTGATTTTTCTTCACCGAAACATGTTGCCAACCCAGTTGTGTACAAGCTCGTGCGGGTTGAAGGTGATGGGAGTTTAGTTCCTGCAACAGATGATGAATTAATTGAGGTGGAGGATTTCCTTGAGTACGACCAGATTGAAATGGGTGATGATGTGGACGCTGGACTCCACGAAGGATGTTCATCAATTGAAAGGTCTTCCTCCGAGAAGCTTCAGTTGGAGTGCTCAGAAGATACTGCAGAGGCAGATCCAGGGAAATTAAATGCACGACTTCAGTATATTGAGCAGATGTTGCAAAAGGTCAAGGAGGAAGAGAAGCTTCATTTGGCCTGTGTATCACCTGGTCTTTCTTATGTAAATGTGGACAGCCAGTATTCTGCTGCTGATTTGCCTGTCATGGATGGGATAATTCAGTGTGATACTTTCTTCCAGGAAATTATTCCTTCTTCAGCACCATCTTTAAATAACAGTCATAGTAATCAATCACAAAGTATTGGTGGGTGTTCTAGACCTTCCGAAGGACAGATAGAAAGTGGATCATCTACCTCTGCTGTCTATTCTACTTTGAAGCCAGATTTTTCAATGATAAAAGGAGAAATATGCTTGGACAAGTTATCAATCAGAGAACTTCATGAACTTTTCAAAGTGACTTTTGGTCGGGAAACTACTGTGAAAGACAAGCAGTGGCTGACGAGAAGGATTGCCATGAGTTTAACTAACTCATGTGATGTTTCAGCAACAACTTTCATAGTTCGAGATAACAAATTAGTTAAAAAAAGTGAGGAAGGTAATGATGGAAATGTGGATGCTGTACTTTTCAAGGATACTATGGCTGGAGAAGAGGATATCAACTGTAAGGATTCATCATGTGCTGAGGCTACTGGAAATGATGATAATCAAGTTGTTTCTGTAAAGAAACTGAGAAGCCATAAAGTGGAACATGATTTTTCTAGTGAGAGTCTCCAGACAGAACAAAGAGCTGCCAAAAGAATCCGTAAGCCCACTAGAAGATATATTGAAGAGCTCTCTGAAAATGAGTCCAGGGACTACAATCCTAGGTTGTTAAGTTTAAACAGAAGTATGGAACTTGGACATGTCTCTCCAAACTCATACAATGGTCCTTCTAGGAATGTTTTTTCAGAGGGGAGAACTTTTGTAACGAGGTTTGACTCTCTGGGAGGTTCTGGAATTTACATACCTTGTGTTTCCCGGATTCGAAGATGTCGTCCAAGGAAAAATATCATGACTCTTACGGATGATATGATTTCTTCCCTGAAATTCCATCAAAGCGGTGGCATGGTGGAGGTTGCCAACTTAAACAATAATGCCCTAGGAGAGCATGGATGTCAGGAAGATGAGGGATGGGACACAGTCTTAAAATCAAGATCTAAACCTGCAAAATCTCAGCAGCGATTTACTGTTGAGCAGAAAGATGAACAGTCTCCAGTACTGGACAGAATTGAGCCACGACAGGAATCAAGACTGAGAAAGGCAGATCTATCTAGCTATAGTTTAGATGACAACATAGCGACTGTCCCCACTTCAAAAGGTGGAATGAGAAGGAAACATCATAGGGCATGGACCCTTGTTGAGGTGATGAAATTGGTTGAAGGTGTATCACGGTGTGGAGCAGGGAGATGGTCTGAGATCAAACGGCTTTCGTTTGCTTCCTACTCATACCGTACGTCTGTTGATCTTAAGGATAAGTGGAGGAATTTGCTTAAAGCTAGCTTTGCGCAGGCAGCTTCAGATGAGGGTATGAACTCACGGAAGCATGGTACAGTCCCCATTCCCGAGCCAATTTTGGTACGAGTAAGAGAGCTCGCCAGGATGAATTCTCAAGTGCCTACAAGCTTCAGCTCAAGCAAACTAACGGCCTGTTCTGAGGTTGCTCATGATGATAGATCAGGGTACTTGTAG 2067 0.4243 MFCSMDVEQVSSFVVLYTGGACEFSMEMLVGIEDNDEGKLEDSGVDRSSSDFSSPKHVANPVVYKLVRVEGDGSLVPATDDELIEVEDFLEYDQIEMGDDVDAGLHEGCSSIERSSSEKLQLECSEDTAEADPGKLNARLQYIEQMLQKVKEEEKLHLACVSPGLSYVNVDSQYSAADLPVMDGIIQCDTFFQEIIPSSAPSLNNSHSNQSQSIGGCSRPSEGQIESGSSTSAVYSTLKPDFSMIKGEICLDKLSIRELHELFKVTFGRETTVKDKQWLTRRIAMSLTNSCDVSATTFIVRDNKLVKKSEEGNDGNVDAVLFKDTMAGEEDINCKDSSCAEATGNDDNQVVSVKKLRSHKVEHDFSSESLQTEQRAAKRIRKPTRRYIEELSENESRDYNPRLLSLNRSMELGHVSPNSYNGPSRNVFSEGRTFVTRFDSLGGSGIYIPCVSRIRRCRPRKNIMTLTDDMISSLKFHQSGGMVEVANLNNNALGEHGCQEDEGWDTVLKSRSKPAKSQQRFTVEQKDEQSPVLDRIEPRQESRLRKADLSSYSLDDNIATVPTSKGGMRRKHHRAWTLVEVMKLVEGVSRCGAGRWSEIKRLSFASYSYRTSVDLKDKWRNLLKASFAQAASDEGMNSRKHGTVPIPEPILVRVRELARMNSQVPTSFSSSKLTACSEVAHDDRSGYL 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g0374 688 MobiDBLite consensus disorder prediction 202 230 - -
Lele44g0374 688 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 568 627 IPR017930 -
Lele44g0374 688 PANTHER MYB-LIKE DNA-BINDING DOMAIN CONTAINING PROTEIN, EXPRESSED 47 670 - -
Lele44g0374 688 Pfam Myb-like DNA-binding domain 575 623 IPR001005 -
Lele44g0374 688 CDD SANT_TRF 574 624 - -
Lele44g0374 688 Gene3D - 563 670 - -
Lele44g0374 688 MobiDBLite consensus disorder prediction 520 534 - -
Lele44g0374 688 SUPERFAMILY Homeodomain-like 570 629 IPR009057 -
Lele44g0374 688 MobiDBLite consensus disorder prediction 511 534 - -
Lele44g0374 688 ProSiteProfiles Myb-like domain profile. 576 623 IPR001005 -
Lele44g0374 688 SMART sant 572 625 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g0374 Lele-ChrLele44 2743002 2749967 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g0374 576 634 Single Myb Histone (SMH) Gene Family AT1G17520 40.984 5.85e-06 47.0