Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g0347 ATGCCTTGCAGAAGAATTCTCTTGAAAAGCTTCGTTCTTGCCTGTTTCAAGCCCAATCGTCAATCTTCTTCTTCATCATGCTCTGCAAATAATCATCATAATCGCCATAAGAAAAATAAATGCTCGGCCTCCGGCAAGGTGAGCTCAAGAAGAGTGTGTCTCTCTGATTTGAGCAATTCTTCTTCTCTGTCTATCATGAGCGATCTCTCAAACTCTGTTCTGGGTTCAAACCTTCATATCTTCACCCTCAAGGAGCTGGAAGAGATCACAAACAATTTCTGCAAATCCAGTGTTGTTGGTGAAGGTGGATTTGGAAAGGTTTATAAGGGCTTCATTGATGATAAACTCAGGCCTGGTTTACAAGCTCAACGTGTTGCAGTTAAAGTTCTGGACTCAGATAGCAAACAGGGACACAGAGAGTGGTTGGCTGAAGTAATCTTTCTGGGGCAATTGAAGCATCCCCATCTGGTGAACTTGATTGGATATTGCTGTGAAGATGAACACAGGCTTCTGGTTTACGAATACATGGAGAGAGGAAATCTAGAGAACAAGCTTTTCAAGGGTTACTTAGCAGCGTTGCCTTGGCTCACAAGAATCAAGATCGCCATTGGCGCCGCGAAAGGACTCGCTTTCCTTCACGAAGAAGACCAACCCGTTATCTACAGAGATGTCAAAGCCTCAAACATCCTATTAGACGCCGATTACAATGCCAAGCTCTCTGACTTCGGTCTCGCCATAGACGGACCAGAAGAAGAAGATCAAATTCATATCACAACTCGAGTTATGGGTACTCATGGTTATGCTGCTCCTGAGTACATAACATCTGGGCATTTGACAACCATGAGCGATGTTTATAGCTTTGGAGTGGTTCTGTTAGAGCTGATTACAGGGAAGAGATCAGTGGATAAGAACCGACCGATCAGAGAGAAGGATTTGGTAGAATGGGCAAGACCATTGTTAAAGGACCCTAGTAAGCTTGAAAGAATAATGGACCCAAGACTTGAGGGCCAATATTCTTATGAAGGAGCTAGAAAAATGGCGTCTCTGGCTCACCAATGTCTGAGCCAAAACCCTAAGTCTCGACCCTCCATGCGAGCCGTGGTTAAGACCTTAGAGCCACTCATGAACCTAACTGATATACCGGTCGGCTGCTTTGTCTATGTGGTCCCCAGTGAAAATAAACCAGTTCAATGTGAGCAGAAGGAGGAGGAGGAGGAGATAATGGAGCAGACGAAGACGACGAAGAAGTCGACGACGAAGAAGAATCGAAAAGGTCAAAGTCGAAGACGTCAGATTAAGATGCTGAGATCATCTGGTTCTATTCATTCAGACACTGCTCTGTACAAAGTTCTTGGTACAAGCCTTTATTCTCCAAAGCAATAA 1383 0.444 MPCRRILLKSFVLACFKPNRQSSSSSCSANNHHNRHKKNKCSASGKVSSRRVCLSDLSNSSSLSIMSDLSNSVLGSNLHIFTLKELEEITNNFCKSSVVGEGGFGKVYKGFIDDKLRPGLQAQRVAVKVLDSDSKQGHREWLAEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMERGNLENKLFKGYLAALPWLTRIKIAIGAAKGLAFLHEEDQPVIYRDVKASNILLDADYNAKLSDFGLAIDGPEEEDQIHITTRVMGTHGYAAPEYITSGHLTTMSDVYSFGVVLLELITGKRSVDKNRPIREKDLVEWARPLLKDPSKLERIMDPRLEGQYSYEGARKMASLAHQCLSQNPKSRPSMRAVVKTLEPLMNLTDIPVGCFVYVVPSENKPVQCEQKEEEEEIMEQTKTTKKSTTKKNRKGQSRRRQIKMLRSSGSIHSDTALYKVLGTSLYSPKQ 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g0347 460 ProSitePatterns Protein kinases ATP-binding region signature. 99 128 IPR017441 GO:0005524
Lele44g0347 460 MobiDBLite consensus disorder prediction 417 431 - -
Lele44g0347 460 SUPERFAMILY Protein kinase-like (PK-like) 68 372 IPR011009 -
Lele44g0347 460 ProSitePatterns Serine/Threonine protein kinases active-site signature. 219 231 IPR008271 GO:0004672|GO:0006468
Lele44g0347 460 ProSiteProfiles Protein kinase domain profile. 93 375 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele44g0347 460 MobiDBLite consensus disorder prediction 400 438 - -
Lele44g0347 460 CDD STKc_IRAK 99 374 - -
Lele44g0347 460 MobiDBLite consensus disorder prediction 20 43 - -
Lele44g0347 460 Gene3D Transferase(Phosphotransferase) domain 1 176 380 - -
Lele44g0347 460 FunFam Serine/threonine-protein kinase BIK1 60 175 - -
Lele44g0347 460 MobiDBLite consensus disorder prediction 400 416 - -
Lele44g0347 460 SMART serkin_6 93 375 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele44g0347 460 PANTHER OS01G0588500 PROTEIN-RELATED 38 374 - -
Lele44g0347 460 Pfam Protein tyrosine and serine/threonine kinase 97 371 IPR001245 GO:0004672|GO:0006468
Lele44g0347 460 Gene3D Phosphorylase Kinase; domain 1 55 175 - -
Lele44g0347 460 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 176 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g0347 Lele-ChrLele44 2575591 2577355 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g0347 79 397 Glycoside Hydrolase AT3G07070 49.068 2.04e-98 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lele44g0347 PK_Tyr_Ser-Thr 1.1e-48 CL0016