Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g0335 ATGTCGAAATTCCCGGACCCGGAGGCGGATGGACGGAGGCTCGGCAAGGCGCCGGAGAGATCCAATTTCATTCAGTATTGTAACGTCTTGAGCCAGCTCTTGAAGGAGAAGAGAGGGTCTGGATCTTTAAGCCTTGGGATGGCTGGGAAAATGGAATCTAGAGCAATTACGAAGGATTCGAAGACAAACCTGGAAAATCCTGATGATACATTGAGACTAAATGCTTCAGCCATGGAATGTCTTCCTCAGTTCGTGGAAAACGCCTGCATCAAGAAGTCTGATTCGAGGTCAGACCCTGAACCCCAAATGACGATTTTTTATGCTGGAAAAGTTTTGGTGTTTAATACTTTTGCTCCTGAAAAGGCCACAGAGATCATGGAACTCGCCACCAAATTAAGCTCTGATTGTACTGTTTCTGACATTAACAAGAACCTCCCAAGTGCTTCTACTGCTAAAGAAAATCAGGATGTGGCCAAAGTTCCTCAAAACAACACTGCTCAGGAACAGGTAGTTGCAAAATCAGGACCTTCACCTATTAAATCAGATATGAGATACCCAAGAAGAGCTTCACTTCTAAAGTTCCTTGAGAAGAGAAAAGAAAGGGTGATTGCTAAAGGACCTTACCAGCTGCACGGTTCAAATAATCCAAAGCCAGATGAAAGCAGTTCAAGAGACCCTGATCAAGGCCAATCTTCCAAATCATTTGACCTTAACATATAG 720 0.4389 MSKFPDPEADGRRLGKAPERSNFIQYCNVLSQLLKEKRGSGSLSLGMAGKMESRAITKDSKTNLENPDDTLRLNASAMECLPQFVENACIKKSDSRSDPEPQMTIFYAGKVLVFNTFAPEKATEIMELATKLSSDCTVSDINKNLPSASTAKENQDVAKVPQNNTAQEQVVAKSGPSPIKSDMRYPRRASLLKFLEKRKERVIAKGPYQLHGSNNPKPDESSSRDPDQGQSSKSFDLNI 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g0335 239 MobiDBLite consensus disorder prediction 203 239 - -
Lele44g0335 239 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 17 218 IPR040390 -
Lele44g0335 239 Pfam tify domain 101 129 IPR010399 -
Lele44g0335 239 MobiDBLite consensus disorder prediction 147 185 - -
Lele44g0335 239 ProSiteProfiles Tify domain profile. 96 131 IPR010399 -
Lele44g0335 239 MobiDBLite consensus disorder prediction 147 174 - -
Lele44g0335 239 Pfam Jas motif 187 209 IPR018467 -
Lele44g0335 239 SMART tify_2 96 131 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g0335 Lele-ChrLele44 2450505 2452903 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g0335 12 217 Tify Gene Family AT1G19180 36.100 8.08e-26 99.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Lele44g0335 tify 1.3e-13 No_clan