Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g0321 ATGGCCTCAGCAACCGCAGCCGCCGCGTCGCCTCGCCAGTTGTCGCAGAAGGAGGCTGACATCCAAATGATGTTGGCCGCCGATGTCCATCTGGCAACCAAAAATTGTGATTTCCAGATGGAGCGTTATGCGTGTGGACTTTGTCCAGGTATTTATATTATTAATCTCGGGAAGACATGGGAGAAGCTCCAGCTTGCCGCCAGGGTCATTGTTGCCATCGAAAACCCTCAGGATATTATTGTTCAGTCGGCAAGACCTTATGGTCAGAGAGCAGTTCTTAAGTTTGCTCAGTACACTGGCGCCCATGCAATTGCAGGAAGGCACACTCCAGGAACATTCACTAATCAGCTGCAGACCTCTTATAATGAGCCTCGTCTTCTCATTCTTACTGATCCAAGAACAGATCATCAGAATGCATTTGCTTATGGTGTTGTTGACTTGCATGTGCAGCCTATTGAGGAAGCTGCTCTTGGAAATATACCAACTATTGCGTTCTGTGACACTGATTCTCCTATGGGATATGTTGACATTGGGATTCCTGCCAATAATAAGGGCAAGCATAGCATTGTGGATTTATTCTTCTATAGAGAACCAGAAGAGGCTAAGCAACAAGAGGAGGATGAAGCAGCTCCTGTCCAAGACTATGCCATCTAG 654 0.4694 MASATAAAASPRQLSQKEADIQMMLAADVHLATKNCDFQMERYACGLCPGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSYNEPRLLILTDPRTDHQNAFAYGVVDLHVQPIEEAALGNIPTIAFCDTDSPMGYVDIGIPANNKGKHSIVDLFFYREPEEAKQQEEDEAAPVQDYAI 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g0321 217 CDD RPS2 24 195 IPR001865 GO:0003735|GO:0005840|GO:0006412
Lele44g0321 217 Gene3D - 20 210 - -
Lele44g0321 217 Pfam Ribosomal protein S2 24 121 IPR001865 GO:0003735|GO:0005840|GO:0006412
Lele44g0321 217 TIGRFAM uS2_euk_arch: ribosomal protein uS2 16 194 IPR005707 GO:0003735|GO:0006412|GO:0015935
Lele44g0321 217 SUPERFAMILY Ribosomal protein S2 16 190 IPR023591 -
Lele44g0321 217 PRINTS Ribosomal protein S2 signature 99 116 IPR001865 GO:0003735|GO:0005840|GO:0006412
Lele44g0321 217 PRINTS Ribosomal protein S2 signature 50 59 IPR001865 GO:0003735|GO:0005840|GO:0006412
Lele44g0321 217 PRINTS Ribosomal protein S2 signature 21 39 IPR001865 GO:0003735|GO:0005840|GO:0006412
Lele44g0321 217 PRINTS Ribosomal protein S2 signature 154 165 IPR001865 GO:0003735|GO:0005840|GO:0006412
Lele44g0321 217 PRINTS Ribosomal protein S2 signature 175 189 IPR001865 GO:0003735|GO:0005840|GO:0006412
Lele44g0321 217 PANTHER 40S RIBOSOMAL PROTEIN SA 9 189 IPR005707 GO:0003735|GO:0006412|GO:0015935
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g0321 Lele-ChrLele44 2343562 2345033 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g0321 3 217 Cytoplasmic Ribosomal Protein Gene Family AT3G04770 66.667 2.40e-112 321