Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g0314 ATGTGTGGAGGTGCTATTATCTCCGACTTCATTCCGGCGGCGGCGGCGGCAGCCGGGTCAGGGAGGAGGTCTCGTCGACTCACGGCCGATTATCTGTGGCCTGATTTGAACAAGCTTGGAGCTGGTAGGAGGTTTTCCAAGGCACTGAAGCCTGAAACTGTCATCGACTTGGACGATGATTTTGAAGCTGATTTCAGGGAATTCAAGGACGATTCCGATATTGATGTTGATGAAGATGATGACGATTTGATGATTGATGTCAAACCCTTTTCTTCATCCGCCACTAAGCCCTCTAAGAGGCCCCTGTCTCGTGGATCTGCTACTGCAAAACCTGAGAAATCCGATGTGCAAGCTGAGAAATCTTTGAAAAGGAGGAAGAATCAATACAGGGGAATCCGCCAGCGCCCATGGGGCAAATGGGCGGCTGAGATCCGCGACCCAAGAAAGGGGGTTCGTGTCTGGCTTGGAACCTTCAACACAGCTGAAGAAGCTGCAAGAGCTTATGATGCTGAGGCAAGAAGGATCCGCGGCAAGAAAGCCAAGGTCAACTTCCCTGATCAGGTTTCATGCACTTCGTCAAAGCGTATCAAGACCGGCAAAGTCGAGAAGCCGCTTCTAAAGGTCAATCTGAACTCTGCCCAGCCCAATCTGACCCAAAACTTCAATGCTGGAACCAATCTGGAGGACTATTACTACTCTATGGAACAGAAACCACAGATTAACAGCCTGTTTGCTGCCCCTGCTGCTAACATGGGATCATTCCCTGAGACCAACAATGTGGTCCCATCACTTTCATCATCTGATGATGTCACTGTTTATTTCAGTTCCGATCAGGCCAGCAACTCATTTGACTACTCTGATTTCGGATTTGGCGAGCAGCCCCCAAAGACCCCGGAAATCTCATCCATTCTTTCTTGTGAATCTCAGTATCTGCAAGATTCCAACCAGAACAACAACAATAACAACTATAACAGCAACATTCAGAATGTGGTACCTGCTGAAAATGGTTCTGGAAAGACTCTGTCAGATGAGCTCGCTGACATAGAATCGGAGCTGAAGTTCTTTCAGACACCTTATCTTGATGGAAGCTGGGATGATGCTTCACTGGGAAGCCTGCTGAGTGCAGAGACAACACAGGATGCGGCAAACCCAATGAGCCTGTGGAGCTTTGATGATCTTCCTCCATCCATGATGGGGGGACTACAAGAATCTGTGGTTGGAGATGGTTTGAGAAAGAAAGTAAAAGGGCTTAAGCTTAAGCATGTGTGGAGGTTATTCACTGGTAGCTAA 1290 0.4822 MCGGAIISDFIPAAAAAAGSGRRSRRLTADYLWPDLNKLGAGRRFSKALKPETVIDLDDDFEADFREFKDDSDIDVDEDDDDLMIDVKPFSSSATKPSKRPLSRGSATAKPEKSDVQAEKSLKRRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDAEARRIRGKKAKVNFPDQVSCTSSKRIKTGKVEKPLLKVNLNSAQPNLTQNFNAGTNLEDYYYSMEQKPQINSLFAAPAANMGSFPETNNVVPSLSSSDDVTVYFSSDQASNSFDYSDFGFGEQPPKTPEISSILSCESQYLQDSNQNNNNNNYNSNIQNVVPAENGSGKTLSDELADIESELKFFQTPYLDGSWDDASLGSLLSAETTQDAANPMSLWSFDDLPPSMMGGLQESVVGDGLRKKVKGLKLKHVWRLFTGS 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g0314 429 MobiDBLite consensus disorder prediction 312 336 - -
Lele44g0314 429 PANTHER DNA-BINDING DOMAIN 99 309 IPR044808 GO:0003700|GO:0009873
Lele44g0314 429 PRINTS Ethylene responsive element binding protein signature 129 140 IPR001471 GO:0003700|GO:0006355
Lele44g0314 429 PRINTS Ethylene responsive element binding protein signature 151 167 IPR001471 GO:0003700|GO:0006355
Lele44g0314 429 Pfam AP2 domain 128 177 IPR001471 GO:0003700|GO:0006355
Lele44g0314 429 SMART rav1_2 128 191 IPR001471 GO:0003700|GO:0006355
Lele44g0314 429 SUPERFAMILY DNA-binding domain 128 187 IPR016177 GO:0003677
Lele44g0314 429 MobiDBLite consensus disorder prediction 312 339 - -
Lele44g0314 429 FunFam Ethylene-responsive transcription factor 2 127 186 - -
Lele44g0314 429 MobiDBLite consensus disorder prediction 89 128 - -
Lele44g0314 429 ProSiteProfiles AP2/ERF domain profile. 128 185 IPR001471 GO:0003700|GO:0006355
Lele44g0314 429 CDD AP2 128 187 IPR001471 GO:0003700|GO:0006355
Lele44g0314 429 Gene3D AP2/ERF domain 127 186 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g0314 Lele-ChrLele44 2299021 2301520 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g0314 1 401 AP2-EREBP Transcription Factor Family AT1G53910 46.098 8.07e-68 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele44g0314 AP2 2.3e-12 CL0081