Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g0303 ATGGATTCCTTCAAGGGTCACGGTAAGGTAGATGAACTCGAGAACCAAGCCTATCGGAAGAAGACACGTAAGCGCATGATCATCCTCATTGTGTCCTCCATAGTTCTAGGGATCGTGATCGTCGCCGGTGTTGCAGGAACCCTCCTCCACACGCATAATACCTCCTCTTCCGCTAACTCTGTCCCTTCCTCTCCTGGGTTAACTCCGGCCGCTTCACTTAAAGCCGTCTGCGACGTGACTTGCTACCCCAACTCTTGCGTCTCCAGAATCTCCTCCCTCCCTAGCTACTCCAACACCACCGACCCTGAAATCCTCTTCAAGCTCTCTCTCCGCGTCGCCATTGATGAGCTCTCGAAGCTCGCGGACTATCCAGGTAAGCTCAGAAGCAATGTCAAGGACCACAGTGTACAGACGGCCCTCGATGTCTGCGGAAATGTTCTTGAAGATGCTGTGGATCGGCTCAACGACTCGATTTCATCGCTGGAAGTCGGAGGAGGAGAGAAGATTCTGACGCCGGCGAAGATTGCCGACATTAGGACGGGGCCGAGAGCCACGATTACGGACCAGGAGACTTGTTTGGACGCGATTGAGGAATTTAATTCCACTGCTGCTGAAGAGATTCTTCTTGATATGAGAACCGCCATGGAGAATTCTACAGAATCTACGAGTAACAGCTTGGCCATTGTCACAAAGATTCTCCGTGTGCTTGCCAAGGTCAAGCTCCCGCTCCATCGGAGGCTACTAGGGTCGAGTTTCCCCGTGGGTTGGCCCGACAGAGCGGAGGCTGCTGCAGCAAGAGACGACCAAAACGACGCCGGATGCAGTGGTGTCCAAGGCCGGAACAGGACATTACAGGACGATCAATGA 867 0.5352 MDSFKGHGKVDELENQAYRKKTRKRMIILIVSSIVLGIVIVAGVAGTLLHTHNTSSSANSVPSSPGLTPAASLKAVCDVTCYPNSCVSRISSLPSYSNTTDPEILFKLSLRVAIDELSKLADYPGKLRSNVKDHSVQTALDVCGNVLEDAVDRLNDSISSLEVGGGEKILTPAKIADIRTGPRATITDQETCLDAIEEFNSTAAEEILLDMRTAMENSTESTSNSLAIVTKILRVLAKVKLPLHRRLLGSSFPVGWPDRAEAAAARDDQNDAGCSGVQGRNRTLQDDQ 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g0303 288 FunFam Pectinesterase 69 233 - -
Lele44g0303 288 Pfam Plant invertase/pectin methylesterase inhibitor 73 228 IPR006501 GO:0004857
Lele44g0303 288 TIGRFAM PME_inhib: pectinesterase inhibitor domain 53 232 IPR006501 GO:0004857
Lele44g0303 288 CDD PMEI-like_3 75 234 - -
Lele44g0303 288 Gene3D Invertase/pectin methylesterase inhibitor family protein 69 233 IPR035513 -
Lele44g0303 288 SMART PMEI_2 68 228 IPR006501 GO:0004857
Lele44g0303 288 MobiDBLite consensus disorder prediction 262 288 - -
Lele44g0303 288 PANTHER PECTINESTERASE 34 247 - -
Lele44g0303 288 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 73 233 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g0303 Lele-ChrLele44 2227592 2228458 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g0303 1 246 Carbohydrate Esterase AT1G53840 50.000 1.87e-67 218