Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g0302 ATGAGTAAAACGAAACAAGACTCCGCCGGAATATCCATTTCCGGCGACCATAGTCCCATGTTCAAGAAGAACAAGAAGCTCTTCTTCATCGCTCTTGTCACTACTCTGCTCCTCGTCTCTGCCATCGTCGGCATTGTAGTCGGAGTTAACTCCCAAAAAAACTCCGGCGACGACGGCCTCCACAATGTCCATTCGAGTATGGCACACGCCATCGTCAAAAGCGCTTGTAGTTCCACCATCTACCCTGAGCTTTGCTTCTCTGCCGTCGTCGCCGAACCCGGCTTCGCCCAGAAAGTCTCCACCCAAAAAGACGTCATAGAACTGTCTCTCAACATAACCATCAGAGCCGTACAACACAACTACTTCACCGTTAAGAACCTCCAAACCAGAAAAGGCCTGACAAAGAGAGAGAAAGCCGCTCTTCACGATTGCTTGGAAACAATTGACAGCACCTTGAACGAAATTCACCGGGCCATCGCCGATCTCGAAGACTCTGTTAATCACGCCGACGACCTCAAGACTCTCATCAGTGCCGCCATAACTAACCAAGAGACCTGCCTCGACGGGTTCTCTCACGACGGCGCTGATAAACGCGTTAGGGAAGGGCTGATGGACGGCCAACTTCACGTGGAACGCATGTGCAGCAACGCACTGGCGATGATCAAGAACATGTCGGACAGTGAAGTATCTATCAATAACAGAAAATTGACAGAAGGGATGGACGAAGTACCCGACGGGATTACGTGGCCGGATTGGATGTCGGCCGGGGACAGGAAGCTTCTGCAGGCACCGACGGTGACTCCAAACGTGGTAGTGGCAGCGGACGGGAGTGGGAAGTACAGGACGGTGTCAGAGGCGGTGGCGGCGGCGCCGGAGGGGAGCAAGACTAGGTATGTGATAAGAATAAAAGCAGGGGTGTACAGAGAGAACGTGGAGGTGACGAAGAAGAAGACAAACATAATGTTCGTCGGAGATGGAAGAACCAGTACGATCATTACAGGTAACAGAAACGTCGTGGATGGAAGCACAACCTTTCACTCTGCAACTGTAGCTGTTGTAGGAGAACGATTCTTGGCTCGAGACATAACCTTCCAAAACACGGCTGGTCCGTCGAAGCACCAAGCGGTGGCTCTCCGGGTGGGCGCCGACCTCTCCGCCTTCTACCGGTGCGACGTGCTCGCCTATCAGGACTCCCTCTACGTCCACAGCAACCGCCAGTTCTTCGTAAGTTGCCTAATAGCAGGCACCGTTGACTTCATCTTCGGTGACTCCGCCGTAGTCTTGCAAAACTGTGACATCCATGCCCGCCGCCCCAACTCCGGCCAGAAGAACATGGTCACCGCCCAAGGCAGAGTCGACCCTAACCAGAATACCGGCATCATCATCCAAAACTGCAGAATCGGTGCCACCCAGGACCTGTTGGCGGTGAAGGGAAGCGTTGAGACGTACTTAGGGAGGCCATGGAAGGAGTATTCGAGGACGGTGATAATAAAGAGTGAAATAAGCGACGTGATACATCCAAGTGGGTGGTTCCCTTGGGAAGGGAATTTTGCATTGAACACATTGTTCTATGGGGAGTATCAGAATACAGGACCTGGTGCTGTTACTTCTTCAAGAGTTAAGTGGAGAGGATTTAGGGTTATTACCAGTGCCACTGAAGCTCAAAGTTTTACTCCCGCAAACTTCATTTCTGGCTCAAGCTGGTTGCGTTCCACAGGCTTCCCATTTACACTTGGTCTGTGA 1743 0.5215 MSKTKQDSAGISISGDHSPMFKKNKKLFFIALVTTLLLVSAIVGIVVGVNSQKNSGDDGLHNVHSSMAHAIVKSACSSTIYPELCFSAVVAEPGFAQKVSTQKDVIELSLNITIRAVQHNYFTVKNLQTRKGLTKREKAALHDCLETIDSTLNEIHRAIADLEDSVNHADDLKTLISAAITNQETCLDGFSHDGADKRVREGLMDGQLHVERMCSNALAMIKNMSDSEVSINNRKLTEGMDEVPDGITWPDWMSAGDRKLLQAPTVTPNVVVAADGSGKYRTVSEAVAAAPEGSKTRYVIRIKAGVYRENVEVTKKKTNIMFVGDGRTSTIITGNRNVVDGSTTFHSATVAVVGERFLARDITFQNTAGPSKHQAVALRVGADLSAFYRCDVLAYQDSLYVHSNRQFFVSCLIAGTVDFIFGDSAVVLQNCDIHARRPNSGQKNMVTAQGRVDPNQNTGIIIQNCRIGATQDLLAVKGSVETYLGRPWKEYSRTVIIKSEISDVIHPSGWFPWEGNFALNTLFYGEYQNTGPGAVTSSRVKWRGFRVITSATEAQSFTPANFISGSSWLRSTGFPFTLGL 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g0302 580 FunFam Pectinesterase 68 225 - -
Lele44g0302 580 PANTHER PECTINESTERASE 38 570 - -
Lele44g0302 580 SUPERFAMILY Pectin lyase-like 265 579 IPR011050 -
Lele44g0302 580 Pfam Plant invertase/pectin methylesterase inhibitor 71 220 IPR006501 GO:0004857
Lele44g0302 580 ProSitePatterns Pectinesterase signature 2. 413 422 IPR033131 -
Lele44g0302 580 Gene3D Invertase/pectin methylesterase inhibitor family protein 66 225 IPR035513 -
Lele44g0302 580 Gene3D - 263 580 IPR012334 -
Lele44g0302 580 TIGRFAM PME_inhib: pectinesterase inhibitor domain 68 224 IPR006501 GO:0004857
Lele44g0302 580 CDD PMEI-like_3 74 225 - -
Lele44g0302 580 SMART PMEI_2 67 220 IPR006501 GO:0004857
Lele44g0302 580 FunFam Pectinesterase 263 580 - -
Lele44g0302 580 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 71 225 IPR035513 -
Lele44g0302 580 Pfam Pectinesterase 269 565 IPR000070 GO:0030599|GO:0042545
Lele44g0302 580 ProSitePatterns Pectinesterase signature 1. 294 313 IPR018040 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g0302 Lele-ChrLele44 2221157 2226493 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g0302 21 580 Carbohydrate Esterase AT3G14310 66.951 0.0 770