Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g0301 ATGTCCAAGAAGAACAGCTACTTAGCTTCCTTCACTTTTCTGCTTCTCTTCTCTTTTACTACTGTCGCCGTTGTCGTCCGAGTTCGCTCTCACAAGAACTCTAACACCGACATCGACAACCTTGTTCCTTTCACTCGATCACACACCACTGTGAAAGTCGCTTGTAGTTATACATTAGCCGTACAGAATAACTCCATCACCATCAAGAATCTCCAAACCAGAACAGACCTCACAAAGAGAGCGAAAATCGCTCTAGAAGATTGCTTACAAATCATTGACAACACTCTTTACGTGCTTCGTCTGTCCATCTCATATCTCAACGACTCAAGTCATCACGCCAACGACCTCAAGACTCGCGTCAGCGCCGCCATAACCGACCAAGAGACTTGCCTGGACGGTTTCTCCCATGATGACAAAGACAGGAACATGAGGAACGGAGAACTGATGGACGGACACATGAACGTTGAACGAATGTCCAGCAACGCTATGGCGATGATTGTGAACATGACTGATTCTGAAGTGTCAAGTAGAAAAAGAAAGATAATGGAAGTGGAGGAAGATGGGGATGGGATTAGGTGGCCGGAGTGGATGTCGGCGGCAGACCTCAGGCTTCTGCAAGCGTCAACAACAGTGACCCCAGATGTGGTTGTGGCGGCAGACGGGAGCGGGAACTACACGACGGTGTCGGAGGCAGTGGCGGCAGCGCCAGAGCAGAGTAGCACGAGGTATGTGATACATATAAAAGCGGGAGAGTACATTGAGCTCGTGGAGGTGCCAAGTGAGAAGACGAATATCATGTTTGTGGGAGATGGAGCATCGACCACTGTCATCACAGGGAGCCGAAACGTTGTTGATGGAAGCACAACCTACAGATCTGCCACAGTAGCGATAGAGGGAGATGGATTCTTGGCACGAGACATAAGTTTCGAGAACACAGCGGGTCCGGCGAAGCACCAAGCGGTGGCTCTGAGAGTGGAAGGCGACCTGTCAGCATTCTACAGTTGCAATTTCCTTGGGTATCAGGACACCCTTTACGTGCGGATCAATCGACAGTTCTTCGTGAACTGCCTCGTCCAAGGCACCGTCGTCGTCATCTTCGGAAACTCAGCCGTCGTGTTCCAGTACTGCGAACTCCGATCACGGCTTCCCTCCTCAGGACAGAACAACATACTCACTGCACAAGGACGAGAAGACCCCAACCAGAACACCGCCATTGTCATCCAAAATTGCAGCATCGATGCCACCGAGGATCTGGAGGCAGCGAATTCGAATGGAAGCGTGGAGTCGTACCTGGGGAGGCCCTGGATGGAGTATTCAAGGACGGTAATAATGGAGACTTACATAAGCGAAATAATAAACCCAGCTGGGTGGTTAGCTTGGAATGGGACATTTGCATTGGACACTTTGTTCTATGGCGAGTATAAGAACATTGGACCTGGGGCTAATACTTCTGAAAGAGTTGATTGGGAAGGCTTTAGGGTTATTACCAATGCTTCTGAAGCTCAAAGTAACACTCCTGCAAGCTTCATTTCTGTCTCCACTTGGTTGAACTCTACTGGCTTTCCATATGTTGTTGGACTTTGA 1584 0.4943 MSKKNSYLASFTFLLLFSFTTVAVVVRVRSHKNSNTDIDNLVPFTRSHTTVKVACSYTLAVQNNSITIKNLQTRTDLTKRAKIALEDCLQIIDNTLYVLRLSISYLNDSSHHANDLKTRVSAAITDQETCLDGFSHDDKDRNMRNGELMDGHMNVERMSSNAMAMIVNMTDSEVSSRKRKIMEVEEDGDGIRWPEWMSAADLRLLQASTTVTPDVVVAADGSGNYTTVSEAVAAAPEQSSTRYVIHIKAGEYIELVEVPSEKTNIMFVGDGASTTVITGSRNVVDGSTTYRSATVAIEGDGFLARDISFENTAGPAKHQAVALRVEGDLSAFYSCNFLGYQDTLYVRINRQFFVNCLVQGTVVVIFGNSAVVFQYCELRSRLPSSGQNNILTAQGREDPNQNTAIVIQNCSIDATEDLEAANSNGSVESYLGRPWMEYSRTVIMETYISEIINPAGWLAWNGTFALDTLFYGEYKNIGPGANTSERVDWEGFRVITNASEAQSNTPASFISVSTWLNSTGFPYVVGL 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g0301 527 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 59 169 IPR035513 -
Lele44g0301 527 CDD PMEI-like_3 30 170 - -
Lele44g0301 527 PANTHER PECTINESTERASE 48 517 - -
Lele44g0301 527 SUPERFAMILY Pectin lyase-like 208 526 IPR011050 -
Lele44g0301 527 Pfam Plant invertase/pectin methylesterase inhibitor 49 165 IPR006501 GO:0004857
Lele44g0301 527 Gene3D - 207 527 IPR012334 -
Lele44g0301 527 Gene3D Invertase/pectin methylesterase inhibitor family protein 28 170 IPR035513 -
Lele44g0301 527 TIGRFAM PME_inhib: pectinesterase inhibitor domain 59 168 IPR006501 GO:0004857
Lele44g0301 527 FunFam Pectinesterase 208 527 - -
Lele44g0301 527 SMART PMEI_2 33 165 IPR006501 GO:0004857
Lele44g0301 527 Pfam Pectinesterase 214 511 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g0301 Lele-ChrLele44 2216728 2219216 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g0301 42 527 Carbohydrate Esterase AT3G14310 55.319 0.0 541