Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g0298 ATGGGTGACTCATTAATGTCTAATGACAAATTGAGCGAATCTACCGCAGTTGAAATGACGGGAAAAATCATGGTGCTAGCTATAATAATCCTCTTCATGGTGGTTGTGTTTGTTCTATTTCTCCATCTCTACGCCAAATGGTTCTGGTGGAGCATTGAAGAAACAACTCCTCCGCCGCCTCGCCGTCGACGCCGACGCCGCTTTGTCTTCGCTCCTGGGCAAGATCCGGCTATTTACGGCGGTCAGAGAAGTGGACTCGATCCGTCACTGCTTTTGTCCTTACCAGTAATAATTTACCAACCTGAAAATTTTAAAGATGGTCTGGAATGTGCTGTTTGTCTCTCTGAGCTTGTTCAAGGAGAAAAAGCGAGGCTTTTACCCAAATGCAATCATGGATTTCATGTGGATTGTATAGATATGTGGTTTCAATCACATTCCACTTGTCCTCTTTGTAGAAACCCGGTTGCTTCTGAACCCCCTAAATGCAATAGCAGTTCAAGTGTTCTAGAAAATTCCTCAGAGAATATTGGTAGCCAATCACAAGCATCAGAACATTTTCAAAACTCAGCTTTAGCTACTACGAGTGGTTCGGAGTCTCCAAATTTTCCAACTAATGTGTTGGTTTGGGGGAATCAAACTCAAGTCAGTTCTATTAATACATCTTTGGAAGAAGAGGGTCCTTCTTCTTCATCTTCTTCTTCTACTACAGCTAGCAGTAGTAGCAGTAACAATAGACGCATTGAAATGATGGTGATTGATATACCAAGTGAGGTGAATTCTTCATCTTTATCTCCTTCTGCAAGCTGGTTTGCTGAAGATGAGCTGAAATCACCGATGACCACAAGACTGAGGTCATTGAAGAGGCTTTTAAGCAGAGACAAAAGGTTAGGTCCTTGTAATCCTGGTCCTGGCTCTCTAGATGTGGAACAAGCAGGGAGAGGACAGAGCTAG 951 0.4311 MGDSLMSNDKLSESTAVEMTGKIMVLAIIILFMVVVFVLFLHLYAKWFWWSIEETTPPPPRRRRRRRFVFAPGQDPAIYGGQRSGLDPSLLLSLPVIIYQPENFKDGLECAVCLSELVQGEKARLLPKCNHGFHVDCIDMWFQSHSTCPLCRNPVASEPPKCNSSSSVLENSSENIGSQSQASEHFQNSALATTSGSESPNFPTNVLVWGNQTQVSSINTSLEEEGPSSSSSSSTTASSSSSNNRRIEMMVIDIPSEVNSSSLSPSASWFAEDELKSPMTTRLRSLKRLLSRDKRLGPCNPGPGSLDVEQAGRGQS 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g0298 316 SUPERFAMILY RING/U-box 93 158 - -
Lele44g0298 316 MobiDBLite consensus disorder prediction 289 316 - -
Lele44g0298 316 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 14 266 - -
Lele44g0298 316 SMART ring_2 110 151 IPR001841 -
Lele44g0298 316 Pfam Ring finger domain 109 152 IPR001841 -
Lele44g0298 316 MobiDBLite consensus disorder prediction 219 245 - -
Lele44g0298 316 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 91 159 IPR013083 -
Lele44g0298 316 CDD RING-H2_EL5_like 109 152 - -
Lele44g0298 316 ProSiteProfiles Zinc finger RING-type profile. 110 152 IPR001841 -
Lele44g0298 316 MobiDBLite consensus disorder prediction 157 205 - -
Lele44g0298 316 MobiDBLite consensus disorder prediction 158 205 - -
Lele44g0298 316 FunFam RING-H2 finger protein ATL3 79 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g0298 Lele-ChrLele44 2200117 2201067 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g0298 1 294 C3H Transcription Factor Family AT1G53820 43.408 2.95e-72 224