Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g0294 ATGGCACCCGATCACGAGGACGACATCAAGGACGAGAAGAACCCCCGCCCCCTCGATGAGGATGACATTGCCCTGCTCAAAACCTATGGTCTGGGACCTTATTCCACAAGTATAAAAAAGGTGGAGAAGGAGATCAAAGAAATGGCAAAGAAAGTCAATGATTTATGTGGTATTAAGGAGTCTGATACTGGTTTAGCTGCACCAAGTCAGTGGGATCTTGTTTCTGATAAGCAAATGATGCAAGAGGAGCAGCCTCTTCAGGTGGTGGCCAGGTGCACAAAGATAATAAATCCAAATTCTGAAGATGCTAAATATGTTATCAATGTTAAGCAGATTGCAAAGTTTGTTGTTGGGCTGGGTGACAAAGTCTCCCCCACTGACATAGAGGAAGGAATGCGTGTTGGGGTTGATAGAAATAAATATCAGATTCAGATTCCTTTGCCTCCAAAAATTGATCCAAGTGTTACCATGATGACAGTGGAAGAGAAGCCAGATGTGACATATAATGATGTGGTCGAACTTCCTATGCTTCATCCTGAGAAATTTGTCAAGCTTGGAATTGATCCTCCAAAGGGTGTTCTCTGCTACGGCCCACCAGGAACTGGCAAAACGCTTTTGGCCAGGGCTGTGGCTAATAGAACGGATGCCTGTTTCATTAGGGTTATCGGGAGTGAGCTAGTTCAGAAATATGTTGGTGAGGGGGCTCGGATGGTTCGTGAACTATTTCAGATGGCCCGATCAAAGAAGGCCTGTATTGTGTTTTTTGATGAAGTTGATGCAATTGGAGGTGCCCGTTTTGATGACGGTGTTGGTGGGGACAATGAGGTCCAGCGCACAATGCTTGAGATTGTGAATCAGCTTGATGGATTTGATGCTCGTGGAAACATCAAAGTTTTGATGGCAACAAACAGGCCTGATACACTAGATCCTGCCCTACTTCGACCTGGCCGTCTGGATCGTAAGGTTGAGTTTGGTCTCCCTGATTTAGAGAGCAGGACTCAGATATTCAAGATACACACAAGAACCATGAACTGTGAGAGGGATATCCGATTTGAACTTCTTGCTCGCCTTTGCCCAAATTCCACTGGAGCTGATATAAGGAGTGTATGCACTGAAGCTGGCATGTATGCTATCCGCGCCCGAAGGAAGACTGTAACAGAGAAGGACTTCCTCGATGCAGTGAATAAAGTCATTAAAGGGTACCAAAAGTTCAGTGCAACTCCCAAGTACATGGTCTACAACTGA 1245 0.4538 MAPDHEDDIKDEKNPRPLDEDDIALLKTYGLGPYSTSIKKVEKEIKEMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVVARCTKIINPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDAVNKVIKGYQKFSATPKYMVYN 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g0294 414 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 170 404 IPR027417 -
Lele44g0294 414 Gene3D - 32 158 IPR012340 -
Lele44g0294 414 CDD AAA 188 326 - -
Lele44g0294 414 ProSitePatterns AAA-protein family signature. 296 314 IPR003960 GO:0005524|GO:0016887
Lele44g0294 414 FunFam 26S protease regulatory subunit 7 159 325 - -
Lele44g0294 414 Pfam AAA+ lid domain 348 391 IPR041569 -
Lele44g0294 414 PANTHER 26S PROTEASOME REGULATORY SUBUNIT 8 400 - -
Lele44g0294 414 Gene3D - 159 325 IPR027417 -
Lele44g0294 414 FunFam 26S protease regulatory subunit 7 327 398 - -
Lele44g0294 414 Gene3D - 327 408 - -
Lele44g0294 414 FunFam 26S protease regulatory subunit 7 33 158 - -
Lele44g0294 414 Pfam ATPase family associated with various cellular activities (AAA) 193 325 IPR003959 GO:0005524|GO:0016887
Lele44g0294 414 SMART AAA_5 189 328 IPR003593 -
Lele44g0294 414 TIGRFAM 26Sp45: 26S proteasome subunit P45 family 84 397 IPR005937 GO:0005737|GO:0030163|GO:0036402
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g0294 Lele-ChrLele44 2178630 2182100 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g0294 185 379 Calmodulin-binding Proteins AT3G56690 40.816 2.09e-41 154