Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g0285 ATGGAATTGCTGATGCAAGATGCCAAAATGCATTTTGATGATAAAGAAGAAGACGAGGAGGAGGAGGAGGAAGAAGAAGCAGAGATAGTTAGAGAGGAAAGCGGCAACTGTAAGAATTACCTTTCTTTCTCAACAAATTACGAAACTAGTCGTCGTCGTCTTCATCATAATCATCATGATCCAAATCAAAATTCATGGTTGGGGCTTCATGATCATCATCACTCTCCACCAGATGCTGCTACAGCCGTCGAATCTCTCAATTCATCGCCTCGATTAGGGTTAGCATCAGCACCGACCTCCAATTTCGCCGGTAATCACAGAAAGCTCGACCTCATGGACTTGTCGCTCGGAGGAATTGGAACCAGCAAGGACGATGAAGAACAAGAAGAAGCTAATTTCCATGGAGGAGGAAGCAGCAGTAACAATGTTGGTGCTGCTATTGAGAAAGAGCACATGTTCGATAAAGTCGTCACTCCCAGTGACGTAGGCAAGCTCAACCGCCTCGTAATACCAAAGCAACACGCAGAGAAGTACTTCCCTCTCAATTCCTCCTCCAACGAGAAAGGGCTGCTCTTGAATTTCGAGGACCGGAACGGCAAGCTATGGCGGTTCCGGTACTCTTACTGGAATAGTAGCCAGAGCTATGTCATGACCAAAGGTTGGAGCCGTTTCGTCAAGGAGAAGAAGCTCGCCGCCGGAGACATTGTCTCGTTCCACCGCGGCGCCGGAGAGTCATATCGTCACCGGTTGTACATAGATTGGAGGCGAAGACCTGATCCCGGCCCACCCGGCCCTGATCTCAACTTGATTACACCTTTTCTTCTTCATCACCCCAATCAGCCGACGACGCAATTTTCTCAGTACTCCATCAGATGGGGCGGCCGATTGTTCTCTCTTCCCTCTCCTGCGCCGCCGCCTCCGCGACAGCTGAACCATAGTAATATGTTTCCCTTATATCATCATCAACAGCAACAAGAAGAGCGACATCATCATCATCATCCATGGCAGTACCAAGTCCATCATCATCATCATAATGCGATGGATTCAAGATCTGCAGGTTCGGTGTATTCGAACTTGATAGGGCAACAAGAAGTAAGAAATGTTCCGATGATTATAGATTCTGTTCCAGTTGATCATTATCATCATTCTCATCAAAACTATTACCATGGTAAAGATAGTAGTACTACTGCTGGTAAAACACTTAGGCTATTTGGGGTGAACATGGAATGTGCTTCTTCTTCGTCGTCGTCTTCATCACCATCAGTAGAGGAATCGGGATGTTGTAATGTGACAGTAATGGCTAATCCATCAATTTCATCTTCGTCTTCTATTATCCCACCGCCTCTTCATCAGTATCTGAGAGTACCCCATGATGAGGATCATCATCCAATTTCATCGTCTTTACCGTTATCATCAGCAGCAAGATTTCAGAGTCGTCGTCATCATCAGAGAGGGGAAACTTCGATGCTTTTTGATTTGGATCCCTCTTTGCATTACAGGCAGTGA 1506 0.4622 MELLMQDAKMHFDDKEEDEEEEEEEEAEIVREESGNCKNYLSFSTNYETSRRRLHHNHHDPNQNSWLGLHDHHHSPPDAATAVESLNSSPRLGLASAPTSNFAGNHRKLDLMDLSLGGIGTSKDDEEQEEANFHGGGSSSNNVGAAIEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLNSSSNEKGLLLNFEDRNGKLWRFRYSYWNSSQSYVMTKGWSRFVKEKKLAAGDIVSFHRGAGESYRHRLYIDWRRRPDPGPPGPDLNLITPFLLHHPNQPTTQFSQYSIRWGGRLFSLPSPAPPPPRQLNHSNMFPLYHHQQQQEERHHHHHPWQYQVHHHHHNAMDSRSAGSVYSNLIGQQEVRNVPMIIDSVPVDHYHHSHQNYYHGKDSSTTAGKTLRLFGVNMECASSSSSSSSPSVEESGCCNVTVMANPSISSSSSIIPPPLHQYLRVPHDEDHHPISSSLPLSSAARFQSRRHHQRGETSMLFDLDPSLHYRQ 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g0285 501 MobiDBLite consensus disorder prediction 1 35 - -
Lele44g0285 501 ProSiteProfiles B3 DNA-binding domain profile. 153 256 IPR003340 GO:0003677
Lele44g0285 501 MobiDBLite consensus disorder prediction 472 501 - -
Lele44g0285 501 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 17 420 IPR044800 GO:0003700
Lele44g0285 501 SUPERFAMILY DNA-binding pseudobarrel domain 150 257 IPR015300 -
Lele44g0285 501 Gene3D - 146 260 IPR015300 -
Lele44g0285 501 Pfam B3 DNA binding domain 153 257 IPR003340 GO:0003677
Lele44g0285 501 CDD B3_DNA 151 240 IPR003340 GO:0003677
Lele44g0285 501 MobiDBLite consensus disorder prediction 53 91 - -
Lele44g0285 501 Coils Coil 5 35 - -
Lele44g0285 501 FunFam B3 domain-containing protein 146 262 - -
Lele44g0285 501 MobiDBLite consensus disorder prediction 14 30 - -
Lele44g0285 501 SMART B3_2 153 258 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g0285 Lele-ChrLele44 2088669 2090174 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g0285 112 412 B3 DNA Binding Superfamily AT1G01030 45.794 9.92e-74 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Lele44g0285 B3 3.1e-28 CL0405