LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele44g0282	ATGTTAGTTTCCGTTCTTTTTGGAGTACTCCTTGTGAGCTTTCCTTTTTCTTGTGGTTCCTTTGAGAACCAAGACAAGGTGCTAGAACAACCATCTACTAATTTACTTCCCAATTCCTGCAACGAAACATGTGGGAAACACCATGTTCCTTTTCCATTCTACGTGAACTCGTCCTGTGTGTCAATTTCTCATGCTTTCAATCTCACTTGCTCGAATTCCTCTTCGCTTCTGCTCAGAATCGGCTCAGAAAACTACCCAGTGATTGAATTTTTCCCTGATGGGGTCCTAGTGGACTTCCCAGGCACATTATCGTGTCGTCAGTACAATGACCTGAACGCGTTTGGCAAAAGTTTTGTGAGAAATGAACACTTTGGGGTCTCAGCGGATAATGTCATTGGTCTCTATGACTGTGAGGATTCTTCACTGTGCAAAGCAGATTGTGAAACAGTTGACTTGCCTGGTTGTGATGGAGACGATGGTGGTGGAGGTGGCTCACTTGGATGCTGCTATCCACTTTCAGACCATAGTATATGGCATGTAGGAGAAGGGTTTTCAGTGTTCTCTGAGTATGGATGCAGGGGATTTTCTAGCTGGGCTGTTCTGAGAGGGTCAAATTCAGGAAAGCGAGGGGTAAAATTGGAATGGGCTATTCCTAAGAACTCATCCATGGAAGTTTGCTCAAGTAATGCAAAATTGGTGAATGCTACATCAGTTGAAGGTGGAGCAAGGTGTACGTGTCTAGATGGATATGTTGGTGATGGATTTGCAAATGGAACTGGATGCTTGCAGGCCTGTGTCAAGGATGGACGTGAAGCATATGGTAGTGACTGCTACATCAGAAGAAAAGATCAAAGAAAATTTGTCATTATTGCTGGAATCCTTGGTCCTGTTCTTATTGTTGCCTCCATGCTAGCCCTATTTTATCTCCTTAAAAGAGCACAAAAACCAGGCACGTTTGACAATGACCAGGCTTACTATCACAACACCTCCTTTCAAAAGGCTTGTAGAACTCAACTGTTCAGCCTCCACGAACTCGATGAAGCCACGAAAGGTTTCGCTGAGGATCAGAAACTCATGCACAGCAACAACAATGGTACAATTTTCGCCGGTGTTTTTGGGGATGGATCACATGCAGCTATCCACAAGTTGCAATATGATACTGAGAAAGACCTTATTCAAGTCCTTGCACAAATTGAGGTTCTCTCTGCTATTTCACATAAGAATTTGTCCCGCCTTCTCGGATGCTGTATAGATTCTGGCTATCCTTCTTTGGTTGTCTATGAGTATCCTTCAAATGGTACCTTGGAGGACCATTTACATCAAAGAAAGGGACATAAACTTTGTTTGGACTGGAACAAAAGATTGACTATTGCTGCAGAAACTGCTAGTGTTCTTGCATTCTTACAATATGACACTTCTCCTCCTATATTCCATCACAACCTTAAACCTGGTTGCATCTTCCTAGATGATGATTTTTCTGTCAAGATTGCAGGATTCGGGCTGGTCAATACCAAATTCAACTATCACTATGACAATAACAACAACATTGAAGGCTTGAATTTCTGCAAGAATGATGTTTATGACATGGGCGTGTTGCTTCTTGAGATCATTTCAGGATCAAAGAATAATCATTTGAACAACTCACCAACTCAAGCACTTCAAAAGATTAGGACAGGGAAGCTCGAAGAAATCATCGATCCCTTGCTCTACTACCACGAGCAACCTCGTACTTGCCAAGAACAGATACAGATAATAGCAGACGTTGCAACAAGATGCATGTTGTTTGGTGCAGATGGAAAACTGGGGATGATCGATGTTGCCAGAGAGTTGACACACGTAACAAAAGAGAGTGTTGTTGATCGAGGAATCACAAAAGGACCTGTTTTGGAAGTGACATTCTCAAATTCTAGTCTTCTTCAGATGATATCAATGTCTCCTGATTCTATGCATATGAGTCAGCGAGAACAGAATAATACTGAAGCTACCGTTCCCCGTTTAAATCAAAGGATTCTTTCATCTTTGTCAAGAAGATCAGTTGCTGCTCACCCTTGGCATGATCTTGAAATTGGACCTGATGCTCCCAACATTTTCAATTGTGTTGTGGAGATCACTAAGGGAAGCAAGGTCAAATATGAACTTGACAAAAAGACTGGAATGATCAAGGTTGATCGCATTCTGTATTCATCTGTTGTTTATCCTCACAACTATGGCTTCATTCCTCGTACTCTTTGTGAAGATAATGATCCACTTGATGTCTTGATCCTTATGCAGGAGCCGGTTCTTCCTGGTTGTTTCCTGAGAGCCAGGGCCATTGGATTGATGCCTATGATTGACCAGGGAGAGACCGATGATAAGATTATTGCAGTATGCGCTGATGATCCAGAGTACAAGCACTATAATGACTTCAAAGAACTTCCACCCCATCGCCTCTCTGAGATAAGGCGCTTCTTTGAAGATTACAAGAAGAATGAGAATAAGGAGGTAGCGGTTAATGACTTTTTGCCTCCTTCTACTGCTGTTGAAGCCATCCAGTACTCAATGGATCTTTATGCAGAGTATATTCTGCGCTCTTTGAGGCAATAG	2583	0.4235	MLVSVLFGVLLVSFPFSCGSFENQDKVLEQPSTNLLPNSCNETCGKHHVPFPFYVNSSCVSISHAFNLTCSNSSSLLLRIGSENYPVIEFFPDGVLVDFPGTLSCRQYNDLNAFGKSFVRNEHFGVSADNVIGLYDCEDSSLCKADCETVDLPGCDGDDGGGGGSLGCCYPLSDHSIWHVGEGFSVFSEYGCRGFSSWAVLRGSNSGKRGVKLEWAIPKNSSMEVCSSNAKLVNATSVEGGARCTCLDGYVGDGFANGTGCLQACVKDGREAYGSDCYIRRKDQRKFVIIAGILGPVLIVASMLALFYLLKRAQKPGTFDNDQAYYHNTSFQKACRTQLFSLHELDEATKGFAEDQKLMHSNNNGTIFAGVFGDGSHAAIHKLQYDTEKDLIQVLAQIEVLSAISHKNLSRLLGCCIDSGYPSLVVYEYPSNGTLEDHLHQRKGHKLCLDWNKRLTIAAETASVLAFLQYDTSPPIFHHNLKPGCIFLDDDFSVKIAGFGLVNTKFNYHYDNNNNIEGLNFCKNDVYDMGVLLLEIISGSKNNHLNNSPTQALQKIRTGKLEEIIDPLLYYHEQPRTCQEQIQIIADVATRCMLFGADGKLGMIDVARELTHVTKESVVDRGITKGPVLEVTFSNSSLLQMISMSPDSMHMSQREQNNTEATVPRLNQRILSSLSRRSVAAHPWHDLEIGPDAPNIFNCVVEITKGSKVKYELDKKTGMIKVDRILYSSVVYPHNYGFIPRTLCEDNDPLDVLILMQEPVLPGCFLRARAIGLMPMIDQGETDDKIIAVCADDPEYKHYNDFKELPPHRLSEIRRFFEDYKKNENKEVAVNDFLPPSTAVEAIQYSMDLYAEYILRSLRQ	860

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele44g0282	860	Gene3D	Transferase(Phosphotransferase) domain 1	431	624	-	-
	Lele44g0282	860	Gene3D	Phosphorylase Kinase; domain 1	325	429	-	-
	Lele44g0282	860	SUPERFAMILY	Inorganic pyrophosphatase	676	855	IPR036649	GO:0000287\|GO:0004427\|GO:0005737\|GO:0006796
	Lele44g0282	860	Coils	Coil	855	860	-	-
	Lele44g0282	860	CDD	pyrophosphatase	695	848	IPR008162	GO:0000287\|GO:0004427\|GO:0005737\|GO:0006796
	Lele44g0282	860	Gene3D	Inorganic pyrophosphatase	678	856	IPR036649	GO:0000287\|GO:0004427\|GO:0005737\|GO:0006796
	Lele44g0282	860	Hamap	Inorganic pyrophosphatase [ppa].	695	851	IPR008162	GO:0000287\|GO:0004427\|GO:0005737\|GO:0006796
	Lele44g0282	860	Pfam	Inorganic pyrophosphatase	699	850	IPR008162	GO:0000287\|GO:0004427\|GO:0005737\|GO:0006796
	Lele44g0282	860	SUPERFAMILY	Protein kinase-like (PK-like)	337	610	IPR011009	-
	Lele44g0282	860	PANTHER	INORGANIC PYROPHOSPHATASE	639	859	IPR008162	GO:0000287\|GO:0004427\|GO:0005737\|GO:0006796
	Lele44g0282	860	Pfam	Protein tyrosine and serine/threonine kinase	374	560	IPR001245	GO:0004672\|GO:0006468
	Lele44g0282	860	FunFam	Soluble inorganic pyrophosphatase 4	678	856	-	-
	Lele44g0282	860	ProSitePatterns	Inorganic pyrophosphatase signature.	746	752	-	-
	Lele44g0282	860	Pfam	Wall-associated receptor kinase galacturonan-binding	40	89	IPR025287	GO:0030247
	Lele44g0282	860	ProSiteProfiles	Protein kinase domain profile.	353	615	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele44g0282	860	FunFam	Putative WAK-related receptor-like protein kinase family protein	431	622	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele44g0282	Lele-ChrLele44	2046069	2052487	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele44g0282	40	613	Receptor kinase-like Gene Family	AT2G23450	29.064	1.07e-55	203

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_URK-3	Lele44g0282		PK_Tyr_Ser-Thr	7.6e-18	CL0016