Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g0281 ATGGACGCATACTCTTCTGGAGAAGAAGTGGTTGTCAAGACAAGAAAACCATATACAATCACAAAGCAAAGAGAACGATGGACAGAGGAGGAGCATAATAAGTTCCTAGAAGCTCTAAAGCTCTATGGAAGAGCATGGCAGCGCATAGAAGTGCATATAGGAACAAAGACTGCTGTGCAAATCAGGAGCCATGCACAGAAGTTCTTTTCAAAGTTGGAGAAAGAGGCCCTTGTAAAAGGTGTTCCAATTGGACAATCTATTGACATAGACATACCTCCTCCACGACCCAAAAGAAAACCAAACAATCCTTATCCTCAGAAGACTAGTGCTGGTACCCAAACATCGCATGGTGGAGGAAAGGATGGAAAACTTCTCGTGTCAGTTTCATCTTCACATTGTAAACAAGCACTGGACTTGGAGAAGGAACCACATCCAGAGGAGTCGCCCTGTTCCTTTGTTACATCAGCAGACAAGAGTTCAATGTCAGTGCCCCTGAAAAATCCATGCACCTTAAGGGAGTTCATGCCTTTGCCAAAAGAATTGGTAAGTCGGGATGAAACGGATGAATCTTTTGTCACTGCTGAACTAAGAGAAAATCAGAAGTTGGAGACATGTGCTGAAAGGAAACACACAGAACAGAGCAATGGCAGAAGTAAAGCTTCTAATATGGAGGATTCTGATGCTTCACATGCAAAATTGGTTCAGAGTAAGAAAACAGACAATCTCAATTGTGCATTGACAATAGAAGGGATGCAAGGAAATCAGAACTACCCAAGACATGTCCCTGTGCACGTTCTTGATGGTAAACTTGGAACAGTTACTCAAAATCCGCCCCAGGATATGTTGTTTCCAGAATCAATATTTCATCCCATGGGTGGGGTTAACAGGCAACCTAATATTTTCACAAATGCATGTGCATCAAATGCGAGTCAAAGTCAAAGTAACTCGGCACAATCTTCAATTCATCAATCATTTGCCGCTCATCCTCCTCCATTCCCGCAAATTCACCAGACTCAAGATCACTACCAATCATTTCTTCAAATGTCCTCCACATTTTCAAGTCTTATAGTCTCCACCCTGCTTCAAAACCCTGCAGCACATGCTGCAGCAAGTTTTGCTGCTACATTTTGGCCCTATGCAAATATAGAAACTTCTGCAGATTCTCCAGCATGCTTGCAAGGAGCCTTGCCATCTAGGCAAATTGGCTCTCCTCCAAGTATGGCAGCTATTGCAGCTGCTACCATGGCTGCTGCAACTGCATGGTGGGCAGCCCATGGATTTCTTCCGTTGTGTGCCCCCTTCCCTTCTGCTTTTCCTTGCCCTCCTGCATCAACTGCAGCAGTTCCATCAATGGATTATGGTGAAATACCAGCAGCCAAAACAGTGCAAGGTGGTGAAACTACTTTCGAGACTCCTCTGCAAGATCAGGATCAAGAATGTACAGATGCTGTGCAAGCTCAACATTCAGCTTCTAAATCACCCGCTAATTCTTCCTTAGAGCCAGAGGAAAGTGGAGAAGCTAAGACAGAGGAAAGTGGAGAAGCTAAGATGGATACTTCATTAAAGGCTACTGATCATGAGAACAACAACGCGAATACTGAGCACCTTGACTCTAACAAAATGAAAGGCAGAAAACTGGTTGACTGTTCCTCATGCGGTTCCAATACCACCTCTAGCAGCGAGGTAGAGACAGATGCATTAGAGAAGAATGAGAAAGAGAAAGAGGAAAACAGAGAACTTGATGCAACCCATTTAGCTATTGACTCCAGATATTGTCGTGCTAGAAGTGCTGGCAGCCTTCCTGATTCTTGGAAGGAGGTCTCTGAAGAGGGGAGGTTGGCCTTTCAGGCTCTCTTCTCCAGGGAGGTGTTGCCACAGAGCTTTTCTCCTCCACATGACTTGACAAATCAGGATCATCAGACGGACAACATTGAGGATAACAAGCATAATATGGATGATAAACTAGAAAACATCAGGAAATGCAGTTCTGACAGTAGAGGAGCGGAGAAAAACCTGTCATTCGTGAAGAAACATGATGAGGAAGAGGTACTGCTAACCATAGGGCTTGGACAAGGAAAGCTGAAGACTAGTCGAACAGGTTTTAAACCTTACAAGAGATGTGCAATGGAAGCCAAGGAAAACATGGTTGGAACTACCAGCAACCAAGATGAAGAGAAAGGTGCCAAGAAAATACGCTTGGAAGCGGGGGCTTCAACATGA 2220 0.4432 MDAYSSGEEVVVKTRKPYTITKQRERWTEEEHNKFLEALKLYGRAWQRIEVHIGTKTAVQIRSHAQKFFSKLEKEALVKGVPIGQSIDIDIPPPRPKRKPNNPYPQKTSAGTQTSHGGGKDGKLLVSVSSSHCKQALDLEKEPHPEESPCSFVTSADKSSMSVPLKNPCTLREFMPLPKELVSRDETDESFVTAELRENQKLETCAERKHTEQSNGRSKASNMEDSDASHAKLVQSKKTDNLNCALTIEGMQGNQNYPRHVPVHVLDGKLGTVTQNPPQDMLFPESIFHPMGGVNRQPNIFTNACASNASQSQSNSAQSSIHQSFAAHPPPFPQIHQTQDHYQSFLQMSSTFSSLIVSTLLQNPAAHAAASFAATFWPYANIETSADSPACLQGALPSRQIGSPPSMAAIAAATMAAATAWWAAHGFLPLCAPFPSAFPCPPASTAAVPSMDYGEIPAAKTVQGGETTFETPLQDQDQECTDAVQAQHSASKSPANSSLEPEESGEAKTEESGEAKMDTSLKATDHENNNANTEHLDSNKMKGRKLVDCSSCGSNTTSSSEVETDALEKNEKEKEENRELDATHLAIDSRYCRARSAGSLPDSWKEVSEEGRLAFQALFSREVLPQSFSPPHDLTNQDHQTDNIEDNKHNMDDKLENIRKCSSDSRGAEKNLSFVKKHDEEEVLLTIGLGQGKLKTSRTGFKPYKRCAMEAKENMVGTTSNQDEEKGAKKIRLEAGAST 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g0281 739 MobiDBLite consensus disorder prediction 503 544 - -
Lele44g0281 739 Gene3D - 26 73 - -
Lele44g0281 739 Pfam Myb-like DNA-binding domain 24 67 IPR001005 -
Lele44g0281 739 MobiDBLite consensus disorder prediction 478 502 - -
Lele44g0281 739 FunFam protein REVEILLE 6 isoform X1 26 74 - -
Lele44g0281 739 MobiDBLite consensus disorder prediction 564 579 - -
Lele44g0281 739 SMART sant 23 71 IPR001005 -
Lele44g0281 739 MobiDBLite consensus disorder prediction 206 231 - -
Lele44g0281 739 PANTHER SWI/SNF COMPLEX-RELATED 7 583 - -
Lele44g0281 739 Coils Coil 563 583 - -
Lele44g0281 739 CDD SANT 26 69 IPR001005 -
Lele44g0281 739 ProSiteProfiles SANT domain profile. 22 73 IPR017884 -
Lele44g0281 739 ProSiteProfiles Myb-like domain profile. 19 69 IPR001005 -
Lele44g0281 739 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 19 73 IPR017930 -
Lele44g0281 739 MobiDBLite consensus disorder prediction 549 563 - -
Lele44g0281 739 MobiDBLite consensus disorder prediction 307 325 - -
Lele44g0281 739 MobiDBLite consensus disorder prediction 102 116 - -
Lele44g0281 739 MobiDBLite consensus disorder prediction 715 739 - -
Lele44g0281 739 MobiDBLite consensus disorder prediction 307 327 - -
Lele44g0281 739 MobiDBLite consensus disorder prediction 478 579 - -
Lele44g0281 739 SUPERFAMILY Homeodomain-like 18 74 IPR009057 -
Lele44g0281 739 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 22 71 IPR006447 GO:0003677
Lele44g0281 739 MobiDBLite consensus disorder prediction 85 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g0281 Lele-ChrLele44 2029568 2041295 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele44g0281 Myb_DNA-binding 3.7e-12 CL0123