Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g0277 ATGCTATGCGATAGACATAAGCCTATAGGTCATTATAAATTGACAGGTGATGGGTCAAAAGCAAATACTGCTGATCTACGGAAGAATAATTTAAAGTTCAGTTCTGATGGAGAGGCTTCAAGGAGTCATCAATTCCTGTATTCCAACTTTCAGTTTCAGACACTTGTAAACCAGAAGAAACCATGCCAAGAAGAGAGGGAAAAAACGTTCTTATCTAGAACAATAACAGAGACCCGAATTCACGCGCCGCAGGAGCTAGAGAGCTGCGTCACCCACGAGACGGCGGAGATGTTGTCGTCGCAGTCGCCGGCGAAATCTGAGAACTGTAGGAGAAAGAGGAAGAGAACGAGACCGATTAAGAGCAAGGAAGACGTGGAGAATCAACGCATGATCCACATTGCCGTCGAACGCAACCGCCGCCTTCAAATGAACGACTACCTTAGTGTTCTCAAAGCACTCATGCCCCCTTCGTATATTCAGAAGGGGGACCAAGCCTCCATTATTGGAGGTGCAATAGATTTTGTGAAGGAATTAGAGCAGCTTCTTCAATCCCTGGAGGCACAGAGAAGAATGAGAAGGAACGATCAGATTGGATTCAGCTATGGAACGACGTCGTCGTGTGGGAAAGAATCAAACTTTGGGGAAGAAGTGAAAGCAGAGAACAAGTCAGAATTTGCAGAAATAGAAGTAACTGTGATTCAAAACCATGTGAACCTGAAAGTACAGTGCAAGAGAAGAACACGGCAGTTAGTGAAGGCCATAGTGGGAATTGAGGATCTTAAGCTAACAATTCTGCACCTAAACATAACTTCTTCACTGGACTCGGTTCTCTATTGTTTCAATCTCAAGATAGAAGAAGAGTGTAAAGCAGTGACAGCAAGTGAAATTGCAGGAGCAGTTGAAGAGATCTTTAGGTTCATTAATGGAAGCAGCTAG 936 0.4412 MLCDRHKPIGHYKLTGDGSKANTADLRKNNLKFSSDGEASRSHQFLYSNFQFQTLVNQKKPCQEEREKTFLSRTITETRIHAPQELESCVTHETAEMLSSQSPAKSENCRRKRKRTRPIKSKEDVENQRMIHIAVERNRRLQMNDYLSVLKALMPPSYIQKGDQASIIGGAIDFVKELEQLLQSLEAQRRMRRNDQIGFSYGTTSSCGKESNFGEEVKAENKSEFAEIEVTVIQNHVNLKVQCKRRTRQLVKAIVGIEDLKLTILHLNITSSLDSVLYCFNLKIEEECKAVTASEIAGAVEEIFRFINGSS 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g0277 311 Coils Coil 175 195 - -
Lele44g0277 311 SMART finulus 133 184 IPR011598 GO:0046983
Lele44g0277 311 MobiDBLite consensus disorder prediction 95 125 - -
Lele44g0277 311 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 127 178 IPR011598 GO:0046983
Lele44g0277 311 PANTHER MAX DIMERIZATION, MAD 85 307 - -
Lele44g0277 311 Gene3D - 117 198 IPR036638 GO:0046983
Lele44g0277 311 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 127 197 IPR036638 GO:0046983
Lele44g0277 311 Pfam Helix-loop-helix DNA-binding domain 128 179 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g0277 Lele-ChrLele44 2002194 2005818 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g0277 120 309 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G01460 56.219 3.59e-68 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele44g0277 HLH 2.8e-08 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0121 01 706913 711944 Lele44g0277 44 2002194 2005818 hybridization
Lele02g0119 02 693315 698386 Lele44g0277 44 2002194 2005818 hybridization