Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g0274 ATGTGGCAATCCCAACAAAACAAAATATCCGCTCTCATCTTCCAGAGGAGCACCTTCCTCCTTCCCACGTGGAGCCCACCTACGTGGACAATCACCAAACGAATTTTTAAACAATGGCCCAAATTCCGCCACGTCACCCTCTCTGCATGGTGGCCCAATCTCTGTCCACCTTTTGATCGACCTCAGATTTTAGTGACTTGGCCAAGGGTGAGTATGCACTTGGAGAATATGGGTGAAGCGGTTCTAGCTAGCGGTGAAAAGAGGATGGAGGTAAGGTTGGACGTAGAAGAAGACATGAACATGATGAACCAGCTGAAGGATGAGAGCTCCACAAAAATGGATAAGAGGGACAAGCTTCTTCCTCAGATGGTGCTCAGAGTTCTGCTGGTGGAAGCTGATGATTCTACTCGCCAGATTATCGCAGCCCTTCTCCGCAAATGCAGTTACAGAGATATCATTTATGGTATTGTATATTTTGAGATCACGATGATGTATGCTAACAGGGTTGGAAGAGGGATTCTTTATTTGGTTGTTGCTCGGACGTGTGGCTTGGTTGATCAATGTTTGTTCTTTAAATATTGTGCTGATACAATTTGTATTTGTTGCTTCTTTCTGATTGCTGCGGTTTCTGATGGATTAAAGGCGTGGGAGACATTGAAGAAGAAAGCTCCTGATATTGATCTCATATTGACTGAAGTGGAGCTGCCGTCAATATCTGGATTTGCACTTCTTACTTTAATCAAGGAGCATGAAATTTGTAGAAACATTCCCGTCATAATGATGTCTTCTCATGATTCTATTAGCATGGCAATGAAATGCATATTAAAAGGCACAGCTGACTTTCTTATAAAACCTGTTCGGAGGAATGTACTGTCAACCTTGTGGCAACATGTGTGGAGAAGGCATCCTAAAAAACTTGAAGCTACTTCAGAAGACAATGCTGCCAGCAATCATTCAACTGATTCTGTGGCTTCCACTCAGAAAAATAATGGATGCTGCAAGAAAAGGAGTGAGGCCCAAAGCACTTGTACATCGCCTATTTTGGAAGCTGAGAGTGCATACATGCAAAATATGCAGGATACGCCCCAGCCCAGGAGTTCTTCAAATTTGAGCAACATTGACACAGTGAAGTATGAAGAGTCTGCAAAACTTAAAAGGGACTCTGCTAGACATAATAATGGAACTATGAAGAGGTCGATTATTTATTCATCAGAGGCTGCTAGGTGCAACAGCATTAGTAACTTCACTAATTTAAGGCTGGAAAAAGACAATTGTGCTGAAACAGAGAATCAGGATGAATCTTTAAGAGCAGAGTTAAATACAGACAATCCTAATGTTGGTACAGAGGTTCATGGCTGCAAGGATGAATTGGTAGAACCTTCTAGAAGAGCTATTGACTTGATTGCTTCATTTGAGAATATTCCAAAGAATGCTGATGAGAATTATAGTCTTGCTGATGGTGGGAGAGACAAGTTTGATTTTGATCCGCAGTTGGAACTTTCCTTGAGAAATTTTTCTGGTAGCTCATGTAAACAAGAACCTGAGGAAAGGCCAACATTGAACCATTCAGATGCATCTGCCTTTTCTTGGTACAGTGGTAATAAGTTGCCACAGCCCCTTTTTCCAGCATTACCAATGAATTCTGCCGAAGCATATAGCACTGAGCTGAACTCCCAGAATTCTAATGAAATATCTGGAATTGATACTTCTTATCAGTATGGTGGAACAAATCATTCTCAGGAGAATACAATCCCACTGGTTCTTCACCAGTCCGGACAAATTGGAGTACAATTGCCAAACATTCATCCTGGATCCTCTCCTGCTACTGGTGTTACTTCTGATCATATATTTAGTGGACATAGGAATGTTGTGCCTTCTATATTCTACACACAATCCAGTGCCCATCCCATATGGAGTCCCAAATCAGTCAGCCAGAAAGAGAATTCTCCCTTTCCCCCAACCACTTCATTCCTGTCAAATGCTGAAAGTCACAACTCAGAACAACATTATCAATGGTCCGATGCCAGTTGTGCTTCTCTTGATAAAAAGACACGGCGTGATAAAAGCTACTTGGATCCTGCAATGCATGATTATCCAGGTGCTTATCAGAATACCAGCATTAGTTTATGCCATGACACTCCGAACCATATTAATGATGGTTCATATGGAAGTATAGACCGTATAAGACAGGTAGATTATACTTCGGCTGTGGTAATTGATAAAACCCCTGAAAGCTTTAGTGACATCAGTTATCATGACTATGACGAATACAGAGGGGCAGATTCTCTGCGTCCCAGCCAAAGGGAAGCTGCTCTAACAAAGTTTAGACTGAAGAGGAAAGACCGATGCTTTGAGAAAAAGGTCAGGTATCAAAGCCGCAAAAAACTGGCTGAGCAGCGTCCTCGGATAAAAGGGCAGTTTGTGCGTCGAGTGCAAAATGATTGTCCACCTGTCGATTCTGGTGGTAGTTCATGA 2475 0.4222 MWQSQQNKISALIFQRSTFLLPTWSPPTWTITKRIFKQWPKFRHVTLSAWWPNLCPPFDRPQILVTWPRVSMHLENMGEAVLASGEKRMEVRLDVEEDMNMMNQLKDESSTKMDKRDKLLPQMVLRVLLVEADDSTRQIIAALLRKCSYRDIIYGIVYFEITMMYANRVGRGILYLVVARTCGLVDQCLFFKYCADTICICCFFLIAAVSDGLKAWETLKKKAPDIDLILTEVELPSISGFALLTLIKEHEICRNIPVIMMSSHDSISMAMKCILKGTADFLIKPVRRNVLSTLWQHVWRRHPKKLEATSEDNAASNHSTDSVASTQKNNGCCKKRSEAQSTCTSPILEAESAYMQNMQDTPQPRSSSNLSNIDTVKYEESAKLKRDSARHNNGTMKRSIIYSSEAARCNSISNFTNLRLEKDNCAETENQDESLRAELNTDNPNVGTEVHGCKDELVEPSRRAIDLIASFENIPKNADENYSLADGGRDKFDFDPQLELSLRNFSGSSCKQEPEERPTLNHSDASAFSWYSGNKLPQPLFPALPMNSAEAYSTELNSQNSNEISGIDTSYQYGGTNHSQENTIPLVLHQSGQIGVQLPNIHPGSSPATGVTSDHIFSGHRNVVPSIFYTQSSAHPIWSPKSVSQKENSPFPPTTSFLSNAESHNSEQHYQWSDASCASLDKKTRRDKSYLDPAMHDYPGAYQNTSISLCHDTPNHINDGSYGSIDRIRQVDYTSAVVIDKTPESFSDISYHDYDEYRGADSLRPSQREAALTKFRLKRKDRCFEKKVRYQSRKKLAEQRPRIKGQFVRRVQNDCPPVDSGGSS 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g0274 824 SUPERFAMILY CheY-like 205 307 IPR011006 -
Lele44g0274 824 Gene3D - 201 401 - -
Lele44g0274 824 MobiDBLite consensus disorder prediction 312 331 - -
Lele44g0274 824 MobiDBLite consensus disorder prediction 795 824 - -
Lele44g0274 824 PANTHER TWO-COMPONENT RESPONSE REGULATOR 125 467 IPR045279 GO:0009736
Lele44g0274 824 Pfam CCT motif 768 810 IPR010402 GO:0005515
Lele44g0274 824 Pfam Response regulator receiver domain 206 292 IPR001789 GO:0000160
Lele44g0274 824 Coils Coil 418 438 - -
Lele44g0274 824 SMART REC_2 180 295 IPR001789 GO:0000160
Lele44g0274 824 MobiDBLite consensus disorder prediction 639 662 - -
Lele44g0274 824 MobiDBLite consensus disorder prediction 308 331 - -
Lele44g0274 824 ProSiteProfiles Response regulatory domain profile. 126 299 IPR001789 GO:0000160
Lele44g0274 824 ProSiteProfiles CCT domain profile. 768 810 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g0274 Lele-ChrLele44 1985351 1990431 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g0274 767 817 Response Regulator Gene Family AT5G24470 84.314 3.07e-20 93.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Lele44g0274 Response_reg 5.8e-16 CL0304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele03g0156 03 842192 846888 Lele44g0274 44 1985351 1990431 ECH
Lele44g0274 44 1985351 1990431 Lele44g0274 44 1985351 1990431 ECH
Lele01g0148 01 860352 865015 Lele44g0274 44 1985351 1990431 hybridization
Lele02g0153 02 844555 848735 Lele44g0274 44 1985351 1990431 hybridization