Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g0271 ATGAGCACCAAACCTGAAACCCTAGCCTTGCACTGCAGCCGGCCGCGAGAAATCGTTGGTAACAAACTCTCTGGTCTCTCTTCCTCGAGTGTAAAAAATGTCGACTGGAGAGATTGCCTGCACTTATGCGCTGAGAAGATCTCGACCTTGGTGAAAGCCGCAAATGTTAATGTTGAATCTTATTGGCCAAGCTTATTTGCAAAGCTTGCCGAGAAGCGAGACCTTGGCGATCTGATCTTGAATGCTGGGGGTGGTGGGGCTCCGGTTGCAGTTGCCGCTACTCCAGCTGCCGCTGGTGGTGCTGCTCCCGCAGCTGCTCCTGCTGCTGAGGAGAAGAAGAAGGAAGAACCCCAAGAAGAGAGCGACGATGACATGGGCTTCAGCTTGTTTGATTAG 396 0.5253 MSTKPETLALHCSRPREIVGNKLSGLSSSSVKNVDWRDCLHLCAEKISTLVKAANVNVESYWPSLFAKLAEKRDLGDLILNAGGGGAPVAVAATPAAAGGAAPAAAPAAEEKKKEEPQEESDDDMGFSLFD 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g0271 131 CDD Ribosomal_P1 44 130 - -
Lele44g0271 131 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P1 42 131 - -
Lele44g0271 131 Hamap 50S ribosomal protein L12 [rpl12]. 39 131 IPR027534 GO:0003735|GO:0005840|GO:0006414
Lele44g0271 131 Pfam 60s Acidic ribosomal protein 44 130 - -
Lele44g0271 131 FunFam 60S acidic ribosomal protein P2 41 83 - -
Lele44g0271 131 MobiDBLite consensus disorder prediction 100 131 - -
Lele44g0271 131 Gene3D - 17 83 IPR038716 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g0271 Lele-ChrLele44 1953979 1954904 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g0271 38 131 Cytoplasmic Ribosomal Protein Gene Family AT5G24510 52.128 4.72e-28 97.8