Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g0256 ATGGATGATTTGATCATCGCTCCTTCTTCCTCTTCCTCTCTTCTCTGCGTCCCCCGAGATGCTCAACCCTCCCTTCAGCAGAAGCTCCAATTCCTTCTTAACAGTCAGCCCGATTGGTGGGTCTACGCCATTTTCTGGCAGATTTCCAATGACGACGTTCATGGCAATCTCCTCCTCTCCTGGGCTGAAGGCCATTTCAATGGCACCAAGGATACCTCCCCTCGTCTCTCCAGTTCCACCTCCAACATCACCTCTGCCACTTCTTCTGCCGCCCCACATTACACGGACCTCCATTGTGACAGATCAAGCCTCATGAACAATATTTACTCTCTCATCAACGACAATTCCCACAATAGCGCCAACATTTGCAGTGATCTCCATGATACCGAGTGGTTCTATGTCATGTCCTTGACTCGCAACTTCTCTGTCGCTTCCTCTGCTTCTCTCCCCAGTAAAGCCTTCACTTCTGGTTCTCTGCTCTGGCTCAACGGTGACCACGACCTTCAATTTTGCAACTGTGAGAGAGCCAAGGAGGCTTATTTACACGGGATTGAGACTCTGATCTGCATACCCACCAGTCATGGGGTCATCGAAATGGGCTCCTCCGATCTCATCCCGGAAAACTGGGCTCTCGCACAGCAGGCCAAGGCTCTGTTCGGGTCTGATCTTATCGCCAAGCAACCCAACAACAACCTGATTCAGTTCTTCGACGATCAGAACATTTCCTTCGCTGATATCGGCATTATCGCCGGCGTGCAAGAAGAAGACGACAACTCCCATGCGCCCGACGGCGATAACAGGGCAAGGAATAATAACGGCAAGAGGAAGGCGGAACAGAGGAATAAGGCGAATTCGGGAATCAAGTTCGGGTATGCGGATTCGGAGCATTCCGATTCGGATTGTAATCCTTCGATAGAGAAAAGAACCCCAAAGAAGAGAGGGAGAAAACCCGGTATGGGCCGCGAAACGCCGCTGAACCACGTGGAGGCAGAGCGGCAGCGACGGGAGAAGCTGAACCACCGGTTCTACGCGCTACGCGCGGTGGTTCCGAACGTATCGAGAATGGACAAGGCATCCCTGTTATCGGACGCCGTGGACTACATCAACGAGCTGAAATCGAAGATCGAGGACCTGGAGTCTCAGATTCAGAAAGATACGACCGACAATAACAACAGCAAAAGGGTGAAAATGGAAATGGCGGACACTAGCACCGCGGACAACCAGAGCGCGACGACTTCAACAGTGGAGCAAACGACAACGACGACGTCATCAGGAGGGGCAAGCGCGACGGGGATGGAGGTGGAGGTGAGGATGATGGGACCGGAGGCAATGGTGAGGGTCCAATCGGAGAAGACGAACCACCCAGGGGCGAGGCTAATGGTGGCGTTGAGAGACTTGAAGCTAGGGGTTCACCATGCGAGCATGTCGTGCGTGAATGAGCTCATGCTGCAAGACGTGCTGGTGAAGATTCCTGAAGATTTGAGAAACGAAGACGCCCTCAAATCTGCCATTGTGGGGCGTTTGGCTCCCTAA 1533 0.529 MDDLIIAPSSSSSLLCVPRDAQPSLQQKLQFLLNSQPDWWVYAIFWQISNDDVHGNLLLSWAEGHFNGTKDTSPRLSSSTSNITSATSSAAPHYTDLHCDRSSLMNNIYSLINDNSHNSANICSDLHDTEWFYVMSLTRNFSVASSASLPSKAFTSGSLLWLNGDHDLQFCNCERAKEAYLHGIETLICIPTSHGVIEMGSSDLIPENWALAQQAKALFGSDLIAKQPNNNLIQFFDDQNISFADIGIIAGVQEEDDNSHAPDGDNRARNNNGKRKAEQRNKANSGIKFGYADSEHSDSDCNPSIEKRTPKKRGRKPGMGRETPLNHVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVDYINELKSKIEDLESQIQKDTTDNNNSKRVKMEMADTSTADNQSATTSTVEQTTTTTSSGGASATGMEVEVRMMGPEAMVRVQSEKTNHPGARLMVALRDLKLGVHHASMSCVNELMLQDVLVKIPEDLRNEDALKSAIVGRLAP 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g0256 510 MobiDBLite consensus disorder prediction 399 428 - -
Lele44g0256 510 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 25 219 IPR025610 -
Lele44g0256 510 MobiDBLite consensus disorder prediction 255 332 - -
Lele44g0256 510 MobiDBLite consensus disorder prediction 256 282 - -
Lele44g0256 510 Pfam Helix-loop-helix DNA-binding domain 326 371 IPR011598 GO:0046983
Lele44g0256 510 Gene3D - 320 389 IPR036638 GO:0046983
Lele44g0256 510 PANTHER MYC 21 507 IPR045084 GO:0003700|GO:0006355
Lele44g0256 510 MobiDBLite consensus disorder prediction 293 308 - -
Lele44g0256 510 Coils Coil 361 388 - -
Lele44g0256 510 CDD bHLH_AtAIB_like 319 384 - -
Lele44g0256 510 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 314 383 IPR036638 GO:0046983
Lele44g0256 510 SMART finulus 328 377 IPR011598 GO:0046983
Lele44g0256 510 MobiDBLite consensus disorder prediction 316 332 - -
Lele44g0256 510 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 322 371 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g0256 Lele-ChrLele44 1795447 1796979 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g0256 25 509 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G00870 34.845 1.13e-77 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele44g0256 bHLH-MYC_N 6e-47 CL0161