Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g0254 ATGCGTTGGACACAGATCGTAGGTCCGCTGGGGTCCTCAGGATTTTCCCTCTCTGTACCGCGAAAGCCGGAGCTAGCTCTTCCTATGGGCCAGTGCTACGGCAAGACCAATCCCCCCGCTGAAAATGACGGTGCCGCAAATACAACCACTATTATAGCCGATTCCGGTGGCCAGCCGCAGTCGCCGCTGCCGTCAGGGAGCGGTGGCAACGGTTTTCCGTCGGCGAAGAACACACCTGCCCGCGCGTCCAACGCGAGTCCATGGCCGAGCCCGTACCCGCAAGGTGTCAACGCGAGCCCGTTTCCGGGTGGCGTGTCGCCCTCGCCGGCGAGGACATCGACGCCCAGGAGGTTTTTTCGACGACCGTTCCCTCCTCCGTCGCCGGCAAAGCATATAAGAGCGTCGTTGGCCAAGCGGCTTGGTCATGGGAAACCCAAGGAGGGCCCGATCCCCGAGGACCGCGGGATGGAACCGGAGCAGGCTCTGGACAAGAGCTTTGGGTATAGTAAGAATTTTGGAGCTAAGTATGAGTTAGGAAAGGAAGTGGGAAGGGGCCATTTTGGCCATACGTGCTCTGCAAGGGGCAAGAAGGGAGAGCTCAAAGACCATCCTGTAGCAGTGAAAATCATCTCGAAGGAGAAGATGACGACAGCAATAGCCATCGAAGATGTTCGGAGAGAGGTGAAGATATTGAAAGCTCTATCTGGGCATAAGCATCTTGTCAAGTATCATGATGCTTGTGAGGATGCCAACAATGTGTACATAGTTATGGAGTATGTCTTTTATCCTGTGTTCATTATTATTTTCATGAAGAACTTGCTTCATAATATAGTAATCTTTCTGGGCTTTTATTGTCTTATCAGATTGTGTGAAGGGGGGGAGCTTCTTGACAGAATTTTGTCAAGGGGAGGGAGGTATACTGAGGAGGATGCAAAAGTTATAGTTTTGCAGATTTTAAGTGTTGTTTCTTTTTGTCATCTTCAAGGTGTTGTGCACCGTGATCTAAAACCTGAGAATTTTCTGTTCACTTCACGAAATGAAGATGCTGATATGAAGCTTATTGATTTTGGTCTCTCTGACTTCATTAGACCAGATGAAAGATTGAATGACATAGTTGGAAGTGCTTACTATGTTGCGCCTGAGGTCCTTCACAGATCCTATAGTCTGGAAGCCGATATATGGAGTATAGGTGTTATCACCTATATCTTGTTATGTGGAAGTCGACCTTTCTGGGCTCAAACAGAATCCGGAATATTTCGTGCAGTGCTCAGAGCAGATCCAAATTTCGATGATTTGCCATGGCCTACTGTATCTGCAGAGGCCAAGGACTTTGTAAAAAGGCTGTTGAACAAGGACTACAGGAAAAGAATGACTGCTGTCCAAGCTCTAACTCACCCTTGGCTGAGGGATGACAACCGTCCTATACCTTTAGATATATTAGTTTACAAATTAGTGAAGTCTTATCTTCGTGCAACACCATTCAAACGAGCAGCACTAAAGGCCCTTGCAAAAGCCTTGTCAGAAGATCAATTAGTGTATCTCAGAGCACAATTCAGATTGTTAGAACCAAACAAAGACGGCTATGTCTCCCTTGATAACTTCAAAATGGCTCTTGTACGTAATTCAACAGATGCCATGAGGGAGTTGAGGGTTCTAGATATTATACATTCGATGGAATCCCTTGCCTATAGGAAGATGGACTTTGGAGAATTTTGCGCAGCTGCAATCAGCACATACCAATTAGAGGCACTTGACACGTGGGAGCACATTGCCTCCAGTGCTTTTGAGCATTTCGAGAGAGAGGGCAACCGTGTGATATCGGTCGAAGAATTAGCAAGAGAGTTGAATCTTGGTCCTTCGTCTTATTCAATTATCAGAGATTGGATACGAAATACTGATGGAAAGCTTAGTTTACTTGGATACACAAAATTTTTGCATGGTGTTACACTGCGTAGTTCAAACACAAGACGCCATTAG 1977 0.4679 MRWTQIVGPLGSSGFSLSVPRKPELALPMGQCYGKTNPPAENDGAANTTTIIADSGGQPQSPLPSGSGGNGFPSAKNTPARASNASPWPSPYPQGVNASPFPGGVSPSPARTSTPRRFFRRPFPPPSPAKHIRASLAKRLGHGKPKEGPIPEDRGMEPEQALDKSFGYSKNFGAKYELGKEVGRGHFGHTCSARGKKGELKDHPVAVKIISKEKMTTAIAIEDVRREVKILKALSGHKHLVKYHDACEDANNVYIVMEYVFYPVFIIIFMKNLLHNIVIFLGFYCLIRLCEGGELLDRILSRGGRYTEEDAKVIVLQILSVVSFCHLQGVVHRDLKPENFLFTSRNEDADMKLIDFGLSDFIRPDERLNDIVGSAYYVAPEVLHRSYSLEADIWSIGVITYILLCGSRPFWAQTESGIFRAVLRADPNFDDLPWPTVSAEAKDFVKRLLNKDYRKRMTAVQALTHPWLRDDNRPIPLDILVYKLVKSYLRATPFKRAALKALAKALSEDQLVYLRAQFRLLEPNKDGYVSLDNFKMALVRNSTDAMRELRVLDIIHSMESLAYRKMDFGEFCAAAISTYQLEALDTWEHIASSAFEHFEREGNRVISVEELARELNLGPSSYSIIRDWIRNTDGKLSLLGYTKFLHGVTLRSSNTRRH 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g0254 658 FunFam CDPK-related kinase 1 504 576 - -
Lele44g0254 658 ProSitePatterns Serine/Threonine protein kinases active-site signature. 330 342 IPR008271 GO:0004672|GO:0006468
Lele44g0254 658 ProSiteProfiles EF-hand calcium-binding domain profile. 509 544 IPR002048 GO:0005509
Lele44g0254 658 PANTHER SERINE/THREONINE-PROTEIN KINASE 160 633 - -
Lele44g0254 658 Gene3D Phosphorylase Kinase; domain 1 172 261 - -
Lele44g0254 658 ProSiteProfiles Protein kinase domain profile. 176 468 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele44g0254 658 Pfam Protein kinase domain 176 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele44g0254 658 Pfam Protein kinase domain 284 468 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele44g0254 658 MobiDBLite consensus disorder prediction 140 156 - -
Lele44g0254 658 Gene3D - 476 648 - -
Lele44g0254 658 MobiDBLite consensus disorder prediction 41 92 - -
Lele44g0254 658 SMART serkin_6 176 468 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele44g0254 658 CDD STKc_CAMK 175 467 - -
Lele44g0254 658 SUPERFAMILY EF-hand 494 647 IPR011992 -
Lele44g0254 658 FunFam CDPK-related kinase 1 169 261 - -
Lele44g0254 658 Gene3D Transferase(Phosphotransferase) domain 1 276 475 - -
Lele44g0254 658 FunFam CDPK-related kinase 1 296 482 - -
Lele44g0254 658 SUPERFAMILY Protein kinase-like (PK-like) 173 477 IPR011009 -
Lele44g0254 658 MobiDBLite consensus disorder prediction 30 156 - -
Lele44g0254 658 ProSitePatterns Protein kinases ATP-binding region signature. 182 208 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g0254 Lele-ChrLele44 1758014 1763890 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g0254 29 652 EF-hand Containing Proteins AT3G50530 55.740 0.0 705
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lele44g0254 Pkinase 7.1e-49 CL0016