Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g0253 ATGGGTGGTGGAGATATCAAGAGCCTGAAGAGCTTCCAGTTCCGACATAATCATCATCATCATGGGAAGAGTCAGAGACAACAACAGGGGATTCCGAAAGGGTGCTTGGCGATAAAGGTGGGACAAGAAGGAGAAGAACAAGAGAGATTTGTTGTGCCCGTGTTGTACTTCAATCATCCATTGTTCTTGCAGCTTCTTAAGGAGGCCGAAGAGGTTTATGGCTTCGATCAGAAGGGGACAATCACCATACCTTGCCATGTCGAAGAGTTTCGGACCGTACGAGGATTGATCGACAGAGAGAAGTCATTTCATCGTCACCAACACTATCATCATCATCAGCCCCACCATCATGTTGGCTGTTTTGGCTTCTAA 372 0.4677 MGGGDIKSLKSFQFRHNHHHHGKSQRQQQGIPKGCLAIKVGQEGEEQERFVVPVLYFNHPLFLQLLKEAEEVYGFDQKGTITIPCHVEEFRTVRGLIDREKSFHRHQHYHHHQPHHHVGCFGF 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g0253 123 Pfam Auxin responsive protein 20 93 IPR003676 GO:0009733
Lele44g0253 123 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 24 92 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g0253 Lele-ChrLele44 1751755 1752126 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g0253 31 91 Calmodulin-binding Proteins AT5G20810 52.459 5.93e-16 68.6