Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g0251 ATGTCAGCTCATTGTGAATTCTCTCATTCTGCCGCAGCAGAAACATACAACACCATCACACCAACTTCTTCTTCTTCCTCATCATCAACAAGAACATCGAGCTTCAGGAACAAGAAGAACAGCAGTAGCAAGATAAGGTTCAGCGAGGAGCAAATTAAGTTATTGGAATCCATTTTCGAGACAGAATCCAAGCTCGACCACTCAAAAAAGTTGCAGCTTGCTTCAGAACTTGGCTTGCAGCCACGCCAGGTGGCCATATGGTTCCAGAACAGACGAGCTCGATCCAAATCCAAGCATCTCCAACGTTCCTACTCTTTACTTCAAGCCAATAACGATGCTCTGGCTTCCAAATTCGAGGCCCTCAAGAAGGAGAATCAAGCATTACTGCTAGAGTTGCAGAAGCTGAAAGATTTGGAAGATGAAACCTTTTGTTGTAAGAAAGTGAGAGATGAAAATATGAAGCCAAGTCCAATAATGGGAAGAGCAGAACAGATACTTGGGGTTGTTTCGGATGATGATTTTGGGCTGGAAGATGAAGAACCTATGAGTCTGAACTTGGCTGATAAGAACACAGATGGTCCCTTGACATCATCTCAAGAAGTTTGGAGAAATATTGCATCTACTGATGACCTCTTTGCCCAATCTGACTGCAGAGTCTTTCCCTCCTCTACCCTCTCAATCCTAGTAAAGCGTCTGAAATTGCAACGTCACTCGTTATTCGTAATGAACAATTTGTCCAATGTCGCCTTGAGAGATAACAGCAACCATTTTTGCAGCTTCAAACCCATTCCAACCCTCGCTCTTTACATTTTGATACCCCTTTTCTTGTTGGGTCTCGCTGTTTCTGTCTTCTTTCTCATTGTAGTTCAAAATGCAGCCTTCTTCGTCTCCTTCGTTTTGCTCTTTGCTCTCATTTTCGCTTTCATAGGTTGGAACACCCACAACTGGAGGAAAAAAGGTGCAATTTTTCTCTTCTTTCGCTCTTTTCCTGACTCTGACATTTGCCGTGCTAAAGAGGGCCAGCTCGTGAAGATCACTGGGCTTGCAACTTGTGGCGGTGTCTCACTGGAATCTTCATATGAAAAGGCAACCGGATGCGTCTATGCGTCCACCCTTTTGTATCAATGCAGAGGATTTGGCATGAGACCACTAAATATAAACAAATCATGCTTTCTTTGGAATTTAGCATATTGTGAGAGATTCTCCACAGACTTTTACATAACGGACCAGAAGTCTGGGACACAAGTTGTGGTGAAAGCTGGTTCCGGCAGCAAGGTTATTCCATTAATTGCAGAGAGCCAAATTATTCATACCTCAGGACAACACAGAATCTTATCTCCTCACTTTAGAAAATGGTTAAAGGACCGAAACCTCTCAGCTGAAGCTCACATGCTTCATCTAGAAGAAGGGTATGTACAGGAAGGTAGTTCTGTGACGGTAATTGGAATGTTGCATAGAAACAATGATATTGTCATGATCATTGAGCCGACCGGGGTAATTTCGACTGGATGCATGTGGCAAAAGCTTCTTCTCCCTGTTGACATTGATGGACTCATAATTGGGATCTCTCAGATGGCTGTCCCTGTGACCACCCAAGAGTCAAGCCAACCCATAGAACTGTAA 1623 0.435 MSAHCEFSHSAAAETYNTITPTSSSSSSSTRTSSFRNKKNSSSKIRFSEEQIKLLESIFETESKLDHSKKLQLASELGLQPRQVAIWFQNRRARSKSKHLQRSYSLLQANNDALASKFEALKKENQALLLELQKLKDLEDETFCCKKVRDENMKPSPIMGRAEQILGVVSDDDFGLEDEEPMSLNLADKNTDGPLTSSQEVWRNIASTDDLFAQSDCRVFPSSTLSILVKRLKLQRHSLFVMNNLSNVALRDNSNHFCSFKPIPTLALYILIPLFLLGLAVSVFFLIVVQNAAFFVSFVLLFALIFAFIGWNTHNWRKKGAIFLFFRSFPDSDICRAKEGQLVKITGLATCGGVSLESSYEKATGCVYASTLLYQCRGFGMRPLNINKSCFLWNLAYCERFSTDFYITDQKSGTQVVVKAGSGSKVIPLIAESQIIHTSGQHRILSPHFRKWLKDRNLSAEAHMLHLEEGYVQEGSSVTVIGMLHRNNDIVMIIEPTGVISTGCMWQKLLLPVDIDGLIIGISQMAVPVTTQESSQPIEL 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g0251 540 Pfam Homeobox associated leucine zipper 98 138 IPR003106 GO:0006355|GO:0043565
Lele44g0251 540 Coils Coil 104 141 - -
Lele44g0251 540 PANTHER OSJNBA0035M09.9 PROTEIN 233 524 IPR040339 -
Lele44g0251 540 CDD homeodomain 46 99 IPR001356 GO:0003677
Lele44g0251 540 Gene3D - 33 105 - -
Lele44g0251 540 Pfam Homeodomain 43 96 IPR001356 GO:0003677
Lele44g0251 540 ProSitePatterns 'Homeobox' domain signature. 73 96 IPR017970 GO:0000981|GO:0006355
Lele44g0251 540 SUPERFAMILY Homeodomain-like 20 98 IPR009057 -
Lele44g0251 540 SMART HOX_1 40 102 IPR001356 GO:0003677
Lele44g0251 540 PRINTS Lambda-repressor HTH signature 78 94 IPR000047 GO:0003677
Lele44g0251 540 PRINTS Lambda-repressor HTH signature 69 78 IPR000047 GO:0003677
Lele44g0251 540 ProSiteProfiles 'Homeobox' domain profile. 38 98 IPR001356 GO:0003677
Lele44g0251 540 MobiDBLite consensus disorder prediction 18 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g0251 Lele-ChrLele44 1718365 1724103 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g0251 46 199 Homeobox Transcription Factor Family AT3G61890 45.506 8.24e-34 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lele44g0251 Homeodomain 5.8e-17 CL0123