Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g0241 ATGAGGTCCATGTCTGTTTTACTTGGAATTTCGTTGTGCATTATGGTTACTTTCATCCGTGATGGGTCACAGAGCTTTATTGGAGTCAGATACGAGATGAAAACTTCAAAAATGGAAGATAAACCATTCCCTGCATGGTCATGGTCTGTTGAACAGTGCTTGAGAGAATACAGTGTTAAACTTGAAAAGGGTTTAAATACCTCCGAGGTTGAGAAGCGACGCGCGAGATATGGTTGGAACGAGTTAGCAAAAGAGAAAGGGAAGCCCTTATGGCAACTAGTATTAGAGCAATTTGATGACATGCTTGTGAAGATTCTTCTGGTTGCAGCTTTTATATCATTCATTCTGGCTTATTTACATGGAAGTGAATCAGGAGAGTCTGGGTTTGAAGCTTATGTGGAGCCACTTGTGATAATTTTGATTTTAGTACTTAATGCCATTGTTGGAGTTTGGCAAGAGAACAACGCTGAGAAGGCACTTGATGCTCTCAAAGAGTTGCAGTGTGAATCTGGAAAAGTGTTAAGAGATGGGCATTTTGCGCCTGATTTGCCTGCAAGAGAGCTTGTTCCTGGTGACATTGTGGAATTGCATGTAGGAGATAAAGTTCCTGCTGACATGAGAGTTGCAGCTTTGAAAACCTCAACTTTGAGAGTTGAACAAAGCTCTTTAACAGGTGAAGCAATGCCTGTTTTGAAAGGCACAAATCCTATTTTCATGGATAATTGTGAATTGCAGGCCAAAGAAAATATGGTTTTTGCAGGCACCACTGTTGTCAATGGGAGCTGTGTCTGTATTGTCATCACCACTGGGATGAACACCGAAATCGGAAAGATACAGAAGCAAATTCATGATGCTTCTTTGGAGGATAGTGACACTCCATTAAAGAAGAAGTTGGATGAGTTTGGTGGGCAGCTTACCACTGCAATTGGGCTGGTTTGCCTTGTTGTGTGGGTTATAAACTACAAAAACTTCCTTTCTTGGGAGCTCGTGGATGGATGGCCTTCAAACATCAAGTTTTCTTTTGAGAAATGCACTTATTATTTTAAAATTGCTGTTGCCTTGGCTGTAGCTGCAATCCCTGAAGGCCTTCCCACTGTAATCACAACTTGTTTGGCCCTTGGTACGAGGAAAATGGCGCAAAAGAATGCAATTGTAAGAAAGCTTCCGAGTGTAGAAACTCTTGGATGCACTACTGTTATTTGTTCAGATAAAACTGGTACTTTGACAACAAATCAGATGTCTGTGACAGAGTTCTTTACTTTGGGAGGAAAAACCACTGCTTCTCGAGTCATCCATGTTGAAGGCTCAACTTATGATCCTAGAGATGGACGAATCGTGGATTGGACTTGCTATAACATGGATGCCAACTTGCAGGCCATGGCAGAAATCTGTGCCATTTGTAATGATGCTGGGATTCATTTTGATGGTCGCCTTTTCTGGGCTACAGGTTTGCCAACTGAAGCCGCTCTCAAGGTTTTGGTAGAAAAGATGGGAGTTCCAGATAACAAGGCAAGGAACAGAATTCGGGATACAGAAGTTGCTGCTGGCAACTTGATTGATGGCAACACTGTTAAGTTAGGTGAGCAAGTGGACTTTATAGATGAGATGAGATGGATTGTCAAGGGAGCTGTTGAGAGTCTACTTGAACGTAGTTCACATGTGCAACTAGCGGATGGATCCCTGGTTCCAATTGATGAGCAATGTAGGGAACTACTGTTTTCAAGACTCTTGGAAATGAGTTCAAAAGGATTGCGGTGCTTGGGTTTTGCATATAAGGATGACTTGGGTGAATTTTCGGACTATTATGCTGAAAGTCATCCTGCTCACAAGAAATTGCTTGATCCTACTTGCTACTCATCCGTTGAGAGTGATATAGTATTTGTTGGTGTTGTTGGTCTAAGAGATCCTCCCCGTGAGGAAGTTCATAGGGCGATGGAGGATTGCAAGGAAGCTGGTATTAGAGTTATGGTGATAACTGGAGATAACAAGTCCACGGCGGAAGCTATTTGTCGGGAAATTAATCTGTTCTCTATAGATGAGGATCTTACAGAGAGAAGTCTGACAGGCAAGGAGTTCATGTCTCTTTGTCATTCAGAACAAGTTAAAATGTTGTCAAGACCTGGAAGCAAGGTATTCTCTCGAGCCGAGCCTAGACACAAGCAAGAGATTGTGAGGTTACTGAAGGATATGGGAGAGATTGTTGCAATGACTGGAGATGGTGTGAATGATGCTCCTGCTCTTAAACTTGCTGACATAGGCATTGCCATGGGCATAACAGGAACGGAGGTTGCAAAAGAAGCTTCAGACATGGTGCTTGCAGATGACAACTTTAGTACCATTGTTTCAGCTGTTTCTGAGGGTCGCTCTATTTACAATAACATGAAAGCCTTTATTAGATACATGATATCATCCAATGTTGGAGAAGTGATATCTATATTCTTGACTGCTGCCCTGGGGATCCCAGAATGTATGATACCTGTGCAACTTTTGTGGGTGAATTTGGTTACTGATGGTCCACCTGCAACAGCTCTGGGTTTTAACCCAGCTGATGTTGATATCATGCGTAAGCCACCTCGTAAAGCTGATGACCCTCTCATCAGTTCATGGGTTCTATTCCGTTATCTGGTAAACAATGCTCAAGTAATTGGTTCCTATGTAGGGATTGCAACAGTGGGAATTTTTGTCTTGTGGTATACGCAAGCATCTTTTCTAAGCATCGATCTGGCCAGTGATGGGCATACAGTCATAGAATTTTCTCAGCTTCGCAACTGGGGGGAGTGTCGTTCATGGCCAAATTTTTCTGCTTCTCCATTTACAGTAAGTGGGGGTCGCCTGATCACATTCTCAAATCCATGTGATTACTTTTCAGTTGGAAAAGTGAAGGCCATGACTCTGTCTCTCTCAGTTTTGGTGGCAATTGAGATGTTTAACTCTTTCAATGCTTTATCTGAAGAAAACAGCTTGTATGAAATGCCCCCATGGAGGAACCCTTGGCTTTTGGTAGCCACAACAGTATCACTAGGACTCCATTGCCTTATCCTCTATGTTCCATTTCTTGCAGAAGCTTTTGGTGTCGTTCCACTAAATCTCAAAGACTGGTTTTTGGTGATCCTGGTTTCTTTACCTGTAATTTTTGTTGATGAGGTTCTGAAACTAGTGGCAAGGAGGAGTAGGAGAGTGAGAAAGGAGAAAACAGCATGA 3201 0.4252 MRSMSVLLGISLCIMVTFIRDGSQSFIGVRYEMKTSKMEDKPFPAWSWSVEQCLREYSVKLEKGLNTSEVEKRRARYGWNELAKEKGKPLWQLVLEQFDDMLVKILLVAAFISFILAYLHGSESGESGFEAYVEPLVIILILVLNAIVGVWQENNAEKALDALKELQCESGKVLRDGHFAPDLPARELVPGDIVELHVGDKVPADMRVAALKTSTLRVEQSSLTGEAMPVLKGTNPIFMDNCELQAKENMVFAGTTVVNGSCVCIVITTGMNTEIGKIQKQIHDASLEDSDTPLKKKLDEFGGQLTTAIGLVCLVVWVINYKNFLSWELVDGWPSNIKFSFEKCTYYFKIAVALAVAAIPEGLPTVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFFTLGGKTTASRVIHVEGSTYDPRDGRIVDWTCYNMDANLQAMAEICAICNDAGIHFDGRLFWATGLPTEAALKVLVEKMGVPDNKARNRIRDTEVAAGNLIDGNTVKLGEQVDFIDEMRWIVKGAVESLLERSSHVQLADGSLVPIDEQCRELLFSRLLEMSSKGLRCLGFAYKDDLGEFSDYYAESHPAHKKLLDPTCYSSVESDIVFVGVVGLRDPPREEVHRAMEDCKEAGIRVMVITGDNKSTAEAICREINLFSIDEDLTERSLTGKEFMSLCHSEQVKMLSRPGSKVFSRAEPRHKQEIVRLLKDMGEIVAMTGDGVNDAPALKLADIGIAMGITGTEVAKEASDMVLADDNFSTIVSAVSEGRSIYNNMKAFIRYMISSNVGEVISIFLTAALGIPECMIPVQLLWVNLVTDGPPATALGFNPADVDIMRKPPRKADDPLISSWVLFRYLVNNAQVIGSYVGIATVGIFVLWYTQASFLSIDLASDGHTVIEFSQLRNWGECRSWPNFSASPFTVSGGRLITFSNPCDYFSVGKVKAMTLSLSVLVAIEMFNSFNALSEENSLYEMPPWRNPWLLVATTVSLGLHCLILYVPFLAEAFGVVPLNLKDWFLVILVSLPVIFVDEVLKLVARRSRRVRKEKTA 1066
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g0241 1066 SUPERFAMILY Calcium ATPase, transduction domain A 173 281 IPR008250 -
Lele44g0241 1066 FunFam ECA1 (ER-TYPE CA2+-ATPASE 1) 801 1060 - -
Lele44g0241 1066 SFLD C1.7: P-type atpase like 382 789 - -
Lele44g0241 1066 Pfam Cation transporter/ATPase, N-terminus 46 113 IPR004014 -
Lele44g0241 1066 FunFam Calcium-transporting P-type ATPase, putative 630 782 - -
Lele44g0241 1066 PRINTS P-type cation-transporting ATPase superfamily signature 401 415 - -
Lele44g0241 1066 PRINTS P-type cation-transporting ATPase superfamily signature 737 756 - -
Lele44g0241 1066 PRINTS P-type cation-transporting ATPase superfamily signature 651 661 - -
Lele44g0241 1066 PRINTS P-type cation-transporting ATPase superfamily signature 219 233 - -
Lele44g0241 1066 PRINTS P-type cation-transporting ATPase superfamily signature 761 773 - -
Lele44g0241 1066 PRINTS P-type cation-transporting ATPase superfamily signature 629 640 - -
Lele44g0241 1066 PANTHER CALCIUM-TRANSPORTING ATPASE 52 1059 - -
Lele44g0241 1066 Gene3D - 411 636 IPR023299 GO:0000166
Lele44g0241 1066 FunFam Calcium-transporting ATPase, putative 148 283 - -
Lele44g0241 1066 Pfam haloacid dehalogenase-like hydrolase 398 751 - -
Lele44g0241 1066 PRINTS Sodium/potassium-transporting ATPase signature 995 1019 - -
Lele44g0241 1066 PRINTS Sodium/potassium-transporting ATPase signature 538 556 - -
Lele44g0241 1066 PRINTS Sodium/potassium-transporting ATPase signature 394 415 - -
Lele44g0241 1066 SUPERFAMILY Calcium ATPase, transmembrane domain M 44 1057 IPR023298 -
Lele44g0241 1066 ProSitePatterns E1-E2 ATPases phosphorylation site. 403 409 IPR018303 -
Lele44g0241 1066 Gene3D - 63 285 - -
Lele44g0241 1066 SFLD p-type atpase 382 789 IPR044492 -
Lele44g0241 1066 Pfam E1-E2 ATPase 167 381 - -
Lele44g0241 1066 SUPERFAMILY HAD-like 399 841 IPR036412 -
Lele44g0241 1066 FunFam Calcium-transporting ATPase, putative 248 397 - -
Lele44g0241 1066 Gene3D - 96 1055 - -
Lele44g0241 1066 Gene3D - 398 782 IPR023214 -
Lele44g0241 1066 Pfam Cation transporting ATPase, C-terminus 822 1053 IPR006068 -
Lele44g0241 1066 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 408 633 IPR023299 GO:0000166
Lele44g0241 1066 SMART Cation_ATPase_N_a_2 44 118 IPR004014 -
Lele44g0241 1066 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 710 821 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele44g0241 1066 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 339 426 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g0241 Lele-ChrLele44 1632374 1637248 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g0241 39 1063 Primary Pumps ATPases(2) AT4G00900 74.432 0.0 1592