Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g0240 ATGATTAAATACAAAGGAGCCCATTTGTGCCGATGGCCAGCTGCCACAGCAAAATTAGGGCTTCGTTACATTCGAACCGCCCATAGTATAAAATCATCGCGTCGACGCGCTGCCATCTCTATATTCCGAAGCTTTCGAGCAAGGGAAACAAATTCGAGATTTTTCAGGCTACTTGGTGGAATAGTTGCAAACATGAGGCCGGTTTTTGTTGGGAACTTCGAGTACGATACCCGTCAATCTGAGCTGGAACGCCTGTTCGCAAAGTATGGGAGGATAGAACGTGTTGATATGAAATCGGGTTTTGCGTTTGTGTATTATGAGGATGAGCGTGATGCTGAAGATGCAATTCGTGCATTAGACAATTTTCCATTTGGTTATGACAAGCGAAGGCTGTCTGTGGAGTGGGCTAGAGGTGAACGTGGTCGTCATCGAGATGGGTCCAGAGCAAACCAGAGGCCCACAAAAACATTATTTGTGATTAACTTTGACCCAATTCGCACTAGAGTTCGTGATATAGAAAGACACTTTGAGCCATATGGGAAAGTTCATCATGTTCGGATTCGTCGGAATTTTGCATTTGTGCAATTTGAGACGCAAGAAGATGCTACTAAAGCTCTTGAGTGTACACACATGAGCAAGATACTGGATAGGGTGGTTTCAGTGGAGTATGCTCTGAGGGATGACGATGAGAGGGGTGACAGATATTATGACAGCCCCAGAAGAGGAGGAGGGGGTTATGGAAGATCACCCAGTCCAGTTGCTCGTAGGCGACCTAGTCCTGATTATGGTCGTCCACGCAGCCCAGTGTACGATAGGTACAATGGACCAGCATATGACAGACGTAGGAGTCCTGATTATGGTAGGCCCAGGAGTCCTGATTATGGTAGGCCAAGGAGTCCTGAATATGGTAGATACCGCAGCCGCTCACCAATCCGAAGGTCCAGGACTTGA 951 0.4711 MIKYKGAHLCRWPAATAKLGLRYIRTAHSIKSSRRRAAISIFRSFRARETNSRFFRLLGGIVANMRPVFVGNFEYDTRQSELERLFAKYGRIERVDMKSGFAFVYYEDERDAEDAIRALDNFPFGYDKRRLSVEWARGERGRHRDGSRANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKVHHVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDDERGDRYYDSPRRGGGGYGRSPSPVARRRPSPDYGRPRSPVYDRYNGPAYDRRRSPDYGRPRSPDYGRPRSPEYGRYRSRSPIRRSRT 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g0240 316 MobiDBLite consensus disorder prediction 275 308 - -
Lele44g0240 316 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 66 138 IPR000504 GO:0003723
Lele44g0240 316 MobiDBLite consensus disorder prediction 230 316 - -
Lele44g0240 316 SUPERFAMILY RNA-binding domain, RBD 66 230 IPR035979 GO:0003676
Lele44g0240 316 Gene3D - 150 234 IPR012677 -
Lele44g0240 316 FunFam Serine/arginine-rich splicing factor RS31 149 237 - -
Lele44g0240 316 FunFam Serine/arginine-rich splicing factor RS31 65 148 - -
Lele44g0240 316 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 155 226 IPR000504 GO:0003723
Lele44g0240 316 Gene3D - 63 149 IPR012677 -
Lele44g0240 316 PANTHER SERINE/ARGININE RICH SPLICING FACTOR 155 308 - -
Lele44g0240 316 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 157 219 IPR000504 GO:0003723
Lele44g0240 316 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 68 124 IPR000504 GO:0003723
Lele44g0240 316 SMART rrm1_1 67 134 IPR000504 GO:0003723
Lele44g0240 316 SMART rrm1_1 156 222 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g0240 Lele-ChrLele44 1623695 1629281 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g0240 68 295 Eukaryotic Initiation Factors Gene Family AT4G34110 27.203 1.18e-09 57.4