Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g0232 ATGGGAAGAGCTCCATGTTGTGCAAAAGTAGGGTTGCAGAGAGGACCATGGACTCCTAAAGAAGATGCATTGCTCACTAAGTATATTCAAGCTCATGGCGAGGGTCAATGGAAATCTCTTCCCAAAAAAGCTGGCCGGTTACCAGGACGAACAGATAACGAAATAAAAAACTACTGGAACACTCATCTCAGCAAAAGAGTCAAAGCATCTCAACAATCAGGACCTGGTGATCGTCATCAACCAAGAGAGAAGAATACGAATAAGAAGAAGAAGAAGCCCGCCACAAAAAATAACAACGGAAAGAACAAATCCGTCAACAGTGATAATGTGGAGGAAGAAGAAGCAAAGAAGAAGACAAATGTATATCTTCCGAAACCAATTAGGGTTAGGGCTTTACATATGAACGAAGATTCTAATAACGGTTCTTCTCAAGCAAGTAGATCTTCAAGCCAGGAGTTATTACAGAAGGAAGATATGGATGTGATGAGTTATGAACCATGGGGTGAGAACGACTTGTTTGGGTTCTTTGTTGAAGAAGATCAGAATATTGACAGAGTCAACGGTTCAATATCAGAAGAAAATATTAATATTAGTATGAAAAATAATGATATGGAATGCGAGTCACTGGAGAGGCTATATGAAGAGTATTTGCAGCTCTTAAAGGATGATAATGTTATTAGTGATGAAAACCAAGGGCAATTGGATTCTTTTGCCCAATCTTTGTTTCTCTGA 732 0.3907 MGRAPCCAKVGLQRGPWTPKEDALLTKYIQAHGEGQWKSLPKKAGRLPGRTDNEIKNYWNTHLSKRVKASQQSGPGDRHQPREKNTNKKKKKPATKNNNGKNKSVNSDNVEEEEAKKKTNVYLPKPIRVRALHMNEDSNNGSSQASRSSSQELLQKEDMDVMSYEPWGENDLFGFFVEEDQNIDRVNGSISEENINISMKNNDMECESLERLYEEYLQLLKDDNVISDENQGQLDSFAQSLFL 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g0232 243 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 67 IPR017930 -
Lele44g0232 243 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 45 - -
Lele44g0232 243 MobiDBLite consensus disorder prediction 135 154 - -
Lele44g0232 243 SUPERFAMILY Homeodomain-like 8 69 IPR009057 -
Lele44g0232 243 SMART sant 13 65 IPR001005 -
Lele44g0232 243 MobiDBLite consensus disorder prediction 34 127 - -
Lele44g0232 243 MobiDBLite consensus disorder prediction 54 76 - -
Lele44g0232 243 MobiDBLite consensus disorder prediction 106 121 - -
Lele44g0232 243 CDD SANT 16 63 IPR001005 -
Lele44g0232 243 Pfam Myb-like DNA-binding domain 14 63 IPR001005 -
Lele44g0232 243 Gene3D - 11 68 - -
Lele44g0232 243 ProSiteProfiles Myb-like domain profile. 9 63 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g0232 Lele-ChrLele44 1565852 1567211 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g0232 1 76 MYB Transcription Factor Family AT5G49330 42.857 4.50e-26 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele44g0232 Myb_DNA-binding 3.4e-13 CL0123