Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g0228 ATGGCACATCTGGGCTGTAATCTCAGAGGCCCGACCAGTTCTCCGGCGGATACAGGTTTGGAAGACGACGATCTGTATACAGAGTTATGGAAGTTATGCGCTGGGCCTCTGGTGGATGTTCCTCGATCTGGGGAGAGAGTTTTTTACTTCCCTCAGGGTCACATGGAACAATTGCAAGCATCAACGAATCAGGAATTGATCCAACAGATTCCCCATTTCAATATTTCTTCTAAGATTCTATGCCGTGTTATGCACATTCAGTTATTGGCGGAACCAGACACTGATGAAGTTTATGCTCGTATTACTTTGCTTCCAGAATCAGATCAAACTGAGCCTACCAGCTCTGATCCATGTCCACCAGAGACTCGGACGCAGGCCTTTCATTCATTTTGCAAAATACTAACAGCATCTGATACCAGCACTCATGGAGGATTTTCAGTTCTGCGAAAGCATGCTAATGAGTGCTTGCCTCAATTGGACATGACCCAAGCAACCCCTACTCAGGAGTTAGCAGCAAAGGATCTTCATGGGTTTGAGTGGAAATTTAAGCATATATTCAGAGGTCAACCAAGGAGACACTTGCTTACAACTGGTTGGAGTACATTTGTCACTTCCAAAAGATTGGTAGCTGGGGACGCATTCGTGTTTTTGAGGGGAGAGAATGGAGAACTGAGAGTTGGTGTCCGGCGCCTTGCCCGGCAACAGAGTCCGATGCCTTCGTCGGTGATATCAAGCCAGAGCATGCATCTTGGAGTTCTTGCCACTGCTTCCCATGCTGTTGCCACTCGTACCATGTTTGTAGTTTACTACAAACCAAGGACTAGACAGTATATTATTGGTTTAAACAAATACCTGGCGGCGATCAACAATAAGTTCACAGTTGGCATGCGTTTCAAGATGAGATTTGAGGGAGATGATTCGCCTGAGAGAAGGTTTTCGGGAACTATTGTTGGCGTTGGCGATTTATCTCAAGAGTGGCCCGACTCGAAGTGGCGGTCATTGAAGGTACAATGGGATGAGCCAGCAACAATCCCAAGGCCAGAGAGGGTTTCTCCCTGGGAGATTGAACCTTTTGTTGCTTCTGCACCTGTAAATCTCGTTCAACCAGCCGTAAAGAGCAAAAGATCTCGCCCTGCTGATGTCCCATCTTCTGAAATGGTTTCCAATTCAGCTGCTTCAGCTTTCTGGTATCAGAGGTCATCCCAGTCCCATGAACTTGCTCAATTAGGTGGCGCAACAGAAACCCAAAGTAATGAAAACCAGGTTTTATGGAGCATAAGGCAGAACACCCACATGAATGGCAATGCGATGAACAACGGTAGCTCCTGCAACGCCAGAGTCCGGGCTGAAGCAGCGTGGCCTCCATCACATTTGAACATCTCTTCAAACTGTTGTCCTGACACCAAAAACAACAAATCTGTTGCAGTTCAACAATCTTCTATCTCTTGCTGGCCAAATGATGCTTCTCCAGCATATGATCAAGTCGAGAATGGGAAGAAATCTGAGAATCCCGTGGGTTGCCGGCTATTTGGTGTCAATTTGACTAACAACTCTAACAATGTTGCTCCTCCAGAAAAGGAGTCAAGAGGCTGCACTGCTAGTCCTAGTGGGTCCAAAGAATCTATTCCTGTTGCAGCATGTGAAACTAAGACAAGTCAGAACCCCAATTGTTCAGTATCCATAAAGGAGCAGAAGCAAGAAACATCTAATGCATCACTAAATGAGAGGCAGAGCAAGCAGGCATCTTTACCATCCACGAGGACTCGCACGAAGGTACAAATGCAAGGAGTGGCTGTTGGTCGCGCTGTTGACTTGACTATGTTGAATGGCTACGACAGTCTGATTGAAGAGCTCGAAAGGTTGTTCGACATTAAAGGAGAGCTTCGTACGCAGGACAAATGGAAGGTTACTTTCATAGATGATGAGAATGAGAGGATGCTCATGGGCGATGATCCATGGCCGGAGTTTTGTAAAATGGTGAAGAGGATTACCATATATTCAAGCGAGGAATTGAAGAAGATGAATGCAACATGCCCGGTTCCTGCATCTTCATCGGAGGATGATGAAACTCTGATCACTGAATTCACAGAATAA 2094 0.4608 MAHLGCNLRGPTSSPADTGLEDDDLYTELWKLCAGPLVDVPRSGERVFYFPQGHMEQLQASTNQELIQQIPHFNISSKILCRVMHIQLLAEPDTDEVYARITLLPESDQTEPTSSDPCPPETRTQAFHSFCKILTASDTSTHGGFSVLRKHANECLPQLDMTQATPTQELAAKDLHGFEWKFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLARQQSPMPSSVISSQSMHLGVLATASHAVATRTMFVVYYKPRTRQYIIGLNKYLAAINNKFTVGMRFKMRFEGDDSPERRFSGTIVGVGDLSQEWPDSKWRSLKVQWDEPATIPRPERVSPWEIEPFVASAPVNLVQPAVKSKRSRPADVPSSEMVSNSAASAFWYQRSSQSHELAQLGGATETQSNENQVLWSIRQNTHMNGNAMNNGSSCNARVRAEAAWPPSHLNISSNCCPDTKNNKSVAVQQSSISCWPNDASPAYDQVENGKKSENPVGCRLFGVNLTNNSNNVAPPEKESRGCTASPSGSKESIPVAACETKTSQNPNCSVSIKEQKQETSNASLNERQSKQASLPSTRTRTKVQMQGVAVGRAVDLTMLNGYDSLIEELERLFDIKGELRTQDKWKVTFIDDENERMLMGDDPWPEFCKMVKRITIYSSEELKKMNATCPVPASSSEDDETLITEFTE 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g0228 697 FunFam Auxin response factor 291 362 - -
Lele44g0228 697 ProSiteProfiles B3 DNA-binding domain profile. 130 232 IPR003340 GO:0003677
Lele44g0228 697 FunFam Auxin response factor 128 232 - -
Lele44g0228 697 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 24 675 IPR044835 GO:0003677|GO:0006355|GO:0009725
Lele44g0228 697 ProSiteProfiles PB1 domain profile. 587 668 IPR000270 GO:0005515
Lele44g0228 697 FunFam Auxin response factor 582 675 - -
Lele44g0228 697 Gene3D - 291 363 - -
Lele44g0228 697 MobiDBLite consensus disorder prediction 1 20 - -
Lele44g0228 697 Pfam Auxin response factor 256 335 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Lele44g0228 697 SMART B3_2 130 232 IPR003340 GO:0003677
Lele44g0228 697 SUPERFAMILY DNA-binding pseudobarrel domain 121 259 IPR015300 -
Lele44g0228 697 CDD B3_DNA 128 230 IPR003340 GO:0003677
Lele44g0228 697 SUPERFAMILY CAD & PB1 domains 582 665 - -
Lele44g0228 697 Pfam AUX/IAA family 564 623 IPR033389 -
Lele44g0228 697 Gene3D - 583 675 - -
Lele44g0228 697 Coils Coil 692 697 - -
Lele44g0228 697 Pfam B3 DNA binding domain 130 230 IPR003340 GO:0003677
Lele44g0228 697 MobiDBLite consensus disorder prediction 516 537 - -
Lele44g0228 697 MobiDBLite consensus disorder prediction 551 589 - -
Lele44g0228 697 Gene3D - 127 231 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g0228 Lele-ChrLele44 1536787 1540979 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g0228 25 674 B3 DNA Binding Superfamily AT4G23980 56.336 0.0 672
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Lele44g0228 AUX_IAA 3.4e-06 CL0072