Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g0206 ATGGCTGTACGAGTCGATAGACATCAGTTTCATTCAAAAACAGAAGAAGAAGAAGAAGAAGAAACAGGGGAACGACTTTCCTTCGTAATTCGCAGTGTTCATACTTCATACAGTAACAAATACTTGCAATCTGTAACCATTAGAGTTGAGGAGATGAGAATCAAAAGAAGAGATGCAGAGCGATGGATGTCCCACTGTATACTTCCCGAGATCAAGGAAAGAATTAGACGGTATGAACATTACAAATGGCAAGAAAATAGAGGTGTTGAAGAAGAAGCATTAATTGGTAACCTTCCTAAAGATCTCATAAGGGACATAAAGCGCCATCTTTGCTTGGATTTACTTAAAAAAGATGAACAATTGTTGGATGCAATGAGTGATAGATTGAAGCCAGTTCTTTATACAGAGAAGAGTTACGTTGTTCATGAAGGAGATCCGGTCGATGAAACGCTCTTCATTATGAGAGGAAAGCTCGCTACTATGACAACAAATGGAGGAAGAACAGTGGAATCTATATCAGAAGTAGAAGCTTTAGCTCTCACGCCTGATGTGAACCAAAACATGGATATAGTTAGACACAGGCAAAATCTAGAAAATCAAGGTTTTATTCCTTGCAATGGAAAACATAGGCGGTCTGTTTCATACAAGCACTGCACAAGGAAGGTAGAGAGGTCATTGCGTGAAGCAGAAGAAAGACTAAAAGATACTTTGGCCAATGGGAATGGATCAGCTTCAACACCAGTTCTTGGTACCTCCATTTATGCATCAAGGTTCGCTACCAGCGTACGAAACTTGCGACAAAACAATGAACAAATGACACAGAGATTGTTGCCTCTGCTGCCTCAGAAGCCATCTGAGCCTGATTTTACTTCTCAAAGTCACTAG 885 0.4023 MAVRVDRHQFHSKTEEEEEEETGERLSFVIRSVHTSYSNKYLQSVTIRVEEMRIKRRDAERWMSHCILPEIKERIRRYEHYKWQENRGVEEEALIGNLPKDLIRDIKRHLCLDLLKKDEQLLDAMSDRLKPVLYTEKSYVVHEGDPVDETLFIMRGKLATMTTNGGRTVESISEVEALALTPDVNQNMDIVRHRQNLENQGFIPCNGKHRRSVSYKHCTRKVERSLREAEERLKDTLANGNGSASTPVLGTSIYASRFATSVRNLRQNNEQMTQRLLPLLPQKPSEPDFTSQSH 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g0206 294 CDD CAP_ED 118 177 IPR000595 -
Lele44g0206 294 SUPERFAMILY cAMP-binding domain-like 66 172 IPR018490 -
Lele44g0206 294 ProSiteProfiles cAMP/cGMP binding motif profile. 118 158 IPR000595 -
Lele44g0206 294 Coils Coil 219 239 - -
Lele44g0206 294 MobiDBLite consensus disorder prediction 1 18 - -
Lele44g0206 294 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 40 168 - -
Lele44g0206 294 MobiDBLite consensus disorder prediction 1 21 - -
Lele44g0206 294 Gene3D Jelly Rolls 113 179 IPR014710 -
Lele44g0206 294 Gene3D Helix hairpin bin 48 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g0206 Lele-ChrLele44 1340534 1343279 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g0206 40 291 Ion Channels AT1G01340 47.771 7.48e-81 256