Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g0205 ATGTACATCTTTGACTCTTTCTCACAGCGTTGGCTCGGTCTTGTATTTATGTTATCCTTCCTAAAGCTGCCATCACAATCCTCACAAGGCTCTCTGCATGTCGCTCTTTTGCTCTCTGCATTCTCTCGGAAAGGGTGGGAAAGAAAAGAAGAGGCCAAGGGCAGCGCCATGTTTAATTATCCTTTGTCTAGATTTGTTTATGTTTTCCTTTATGAAGTGATCACGATTGAAGTGGTGGTGATTGCTACCTACCTGGATAGTTTAATTATGAATTCAAAGGGACATAAATTTGTGAGGTTTGATGATTGGAGTTCAGAGTCATCATCTACTACTGAGCAGAAAAATTCTAGCGATGATGGGTATCATGGAAGAAAAATGAGACCAAGCGTAAGCGCTGTTTTAGATAGCATCAAAAGAAGACTTGAGAATGGGTCTGATAAGATAAAAAACTTGAAAAACTCCTCAGCTGTTCATCCTATAAGTGATAGACCGCCCAAGACATTGGCTCCTAGAAGCAGAAGCAAAATTCTTGATCCACAGGGGTCGTTCCTTCAGGAATGGAACAAAATATTTGTAATCACATCTGTGATGGCTGTATCTGTGGATCCACTGTTCTTTTACATCCCAGTGATTGTAGACACAGAGCAATGCCTTAAGTTGGATGGAAACTTGCAGATTATCGCTTCTGTTCTTCGTACATTCTTTGATCTTTTCTACGTTCTTCACATAATCTTTCAGTTTCGAACTGGGTTTATTGCTCCTTCTTCTCGGGTATTTGGAAGGGGCGAGCTGGTTAATGATCCTCGCGCTATCATGACAAGATACTTATCTTCATACTTTATCATCGATGTTCTATCAATTATTCCACTTCCACAGGTGGTTGTTTTATTTATCATTCCAGAATTGAAGAACTCAGTTCCATTTGTGGCAAAGGACTTGTTGACATATATGATCTTAATCCAGTATGTGCCAAGACTCTGGCGAATTTACCCATTATTTGAAGAAGTAACAAGAACTTCTGGCATCCTCACAGAGACAGCATGGGCTGGAGCTGCTTATAATCTTTTTCTTTATATGTTGGCAAGTCATTTGGTAGGAGCTTTTTGGTACCTGTTTTCGGTAGAATCAGAGCTTCGGTGCTGGCGCAGAGCATTGAAAACTACAGAATATAATGATAATGAGCATCTGAGCTGTCCTAACAAGAATGCAAATGTCACTTCACTTCTCACTAATTCCTGTATTGTTGTTGATCCTTCTGAAATCACCAACTCAACAACCTTCAATTTTGGAATATATGCTGATGCTCTACAATCTGGTGTGGTTAAATCAACAACAGATTTTCCTCAGAAGTTCTTCTACTGCTTCTGGTGGGGCTTGCGCAATTTGAGTTCTGTTGGACAGAATCTTGCGACAAGTACTTATGTCGGGGAGATAATCTTTGCTATTGGCATTGCCGTCTTTGGATTAGTTCTGTTCTCTTTGCTTATTGGAAACATGCAGAAATATCTGCAATCTACAACTGTTAGAGTTGAGGAGATGCGAGTCAAAAGGAGAGATGCAGAACAATGGATGGCCCACCGTATGCTTCCTGAGAACTTAAGGAAAAGAATTAGACGGAATCAACATTACAGATGGCAAGAAAATCGAGGTGTTGAAGAAGAAGCGTTGATTCGCAACCTTCCTAAAGATCTTAGAAGGGACATAAAGCGTCATCTTTGCTTGTCTTTACTTAAAAAAGTGCCAATCTTTGAGAAAATGGATGAACAATTGTTGGATGCAATGAGTGATAAATTGAAACCAATTCTTTACATAGAGAACAGTTACATTGTTCGTGAAGGAGATCCGGTCGATGAAATGCTCTTCATTATGCGAGGAAAGCTTGCTACTACAACAACAAATGGAGGAAGAACTGGTTTCTTTAACTCCTCAGTTCTCCAAGCTGGTGACTTCTGTGGAGAAGAGCTTCTGACGTGGGCCTTGGACCCCAATACCTCTTCAAATCTTCCCATTTCAACAAGAACAGTGGAATCCATATCAGAAGTTGAAGCTTTTGCTCTCATGCCTGATGACTTGAAGTTTTTTACTTCTCAATTTCGAAGACTTCACAGCAAACAGCTTCAGCACACTTTCAGGTTTTATTCCTTGCAATGGAGGACATGGGGTGCCTGTTTCATACAAGCAGCTTGGCGTCGCTACTGCAGAAAGAAGATAGAGAGGTCATTGCGTGAAGCAGAAGAAAGACTGAAAGATACTTTGGCCAATGAGAATGGATCATCATCAACACCAAGTCTTGGTGCCACCGTTTATGCATCCAGATTCGCTACCAACGCCTTACGAAACTTGCGACAAAACAGCCAACACAACAGCAGAATGACACACAGATTGCTGCCTCAGAAGCCATCTGAGCCTGATTTTACTTCTGAAGGTAGCTAG 2433 0.4098 MYIFDSFSQRWLGLVFMLSFLKLPSQSSQGSLHVALLLSAFSRKGWERKEEAKGSAMFNYPLSRFVYVFLYEVITIEVVVIATYLDSLIMNSKGHKFVRFDDWSSESSSTTEQKNSSDDGYHGRKMRPSVSAVLDSIKRRLENGSDKIKNLKNSSAVHPISDRPPKTLAPRSRSKILDPQGSFLQEWNKIFVITSVMAVSVDPLFFYIPVIVDTEQCLKLDGNLQIIASVLRTFFDLFYVLHIIFQFRTGFIAPSSRVFGRGELVNDPRAIMTRYLSSYFIIDVLSIIPLPQVVVLFIIPELKNSVPFVAKDLLTYMILIQYVPRLWRIYPLFEEVTRTSGILTETAWAGAAYNLFLYMLASHLVGAFWYLFSVESELRCWRRALKTTEYNDNEHLSCPNKNANVTSLLTNSCIVVDPSEITNSTTFNFGIYADALQSGVVKSTTDFPQKFFYCFWWGLRNLSSVGQNLATSTYVGEIIFAIGIAVFGLVLFSLLIGNMQKYLQSTTVRVEEMRVKRRDAEQWMAHRMLPENLRKRIRRNQHYRWQENRGVEEEALIRNLPKDLRRDIKRHLCLSLLKKVPIFEKMDEQLLDAMSDKLKPILYIENSYIVREGDPVDEMLFIMRGKLATTTTNGGRTGFFNSSVLQAGDFCGEELLTWALDPNTSSNLPISTRTVESISEVEAFALMPDDLKFFTSQFRRLHSKQLQHTFRFYSLQWRTWGACFIQAAWRRYCRKKIERSLREAEERLKDTLANENGSSSTPSLGATVYASRFATNALRNLRQNSQHNSRMTHRLLPQKPSEPDFTSEGS 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g0205 810 Coils Coil 734 754 - -
Lele44g0205 810 MobiDBLite consensus disorder prediction 781 810 - -
Lele44g0205 810 Gene3D Helix hairpin bin 509 573 - -
Lele44g0205 810 SUPERFAMILY cAMP-binding domain-like 511 704 IPR018490 -
Lele44g0205 810 SMART cnmp_10 582 713 IPR000595 -
Lele44g0205 810 Gene3D Jelly Rolls 580 700 IPR014710 -
Lele44g0205 810 FunFam Cyclic nucleotide-gated ion channel 1 580 698 - -
Lele44g0205 810 FunFam Cyclic nucleotide-gated ion channel 1 509 573 - -
Lele44g0205 810 SUPERFAMILY Voltage-gated potassium channels 178 504 - -
Lele44g0205 810 Coils Coil 134 154 - -
Lele44g0205 810 MobiDBLite consensus disorder prediction 781 795 - -
Lele44g0205 810 MobiDBLite consensus disorder prediction 106 126 - -
Lele44g0205 810 Pfam Cyclic nucleotide-binding domain 605 692 IPR000595 -
Lele44g0205 810 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 155 805 - -
Lele44g0205 810 CDD CAP_ED 582 713 IPR000595 -
Lele44g0205 810 Pfam Ion transport protein 187 510 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Lele44g0205 810 Gene3D - 192 506 - -
Lele44g0205 810 ProSiteProfiles cAMP/cGMP binding motif profile. 582 666 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g0205 Lele-ChrLele44 1333335 1338793 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g0205 90 808 Ion Channels AT5G53130 63.411 0.0 927