Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g0202 ATGCCCACAAAACTCTTATCTCAACTTCATCTTATCCAAGCTTCTTCCTTCGCTCGTTTCCCTTCCATGAAGCTTGGAGCCTCCATTCCAACGTCCCGACCAGTCCCCATTTTCTCTCGTATCTTCCCCTTCAGGATCAAGTACCTGGCGTTGGAGTCTCGTGCTTTACGGAATGAACTTCTCGGTGTACGGCGATTCTCGACTCGGTCGTTTGCTGGGAGGGATGGCTCGAGGTCCGAGTTCATCCGGGGGAATCGAGATACAGAAAGGGTAAGGGTTTCTAAGAGCTTGATTGAGGATGAGGCTGAACTCAGTGACTGGGTTGACGATTTGAAGACCGATTCTTATCGAGGTCGACTCACCAGCGAAGAGGATGACTCGGATAGGGAGAGTAGTCGCAGTGGAGGGAGGAGTAGAGCACCTGTTTCGATGAAAGGGAGCAGGGAGAGTGGCTCAAGCAGATTTGGTGAACCAACACGGAGGAGAACTCGGGATACATTTGAGTCGTTTTCACGGAATTCTCGTATGAGCCGGAGATTTGAAGATGATGACGATGAGGATGGAAATGAATTCCGTTCTTCGAGAAGTGGTAGAGTGTCCGAAGGTCAGTCTATCTTGGGGAAGAGAAGTGGTGAAGAGTCGCGAGGTGGGAGAAGGGATGGAAGGAGAAAATCGTATTTGATGAGTGTGGATGATGCTGATGAAGATGAACAGGGGCCAAAGAAGTGCATGGGACGTTTTGGAGATCTTATTAGTGATGAAGACAGTGACGCTGAAGATACTGCGGATGAATATGGTGATGATGATTTACTGAAGAAGACTTTAGATTCTCAGATGGGTCGAGAAAAGGAGCTGAAGAAGAGCAGTCCAACAAGAGGTTCTCCCGAGAGATCTGACAATTATTTAAGTGAGACCAGATTTGATCAATGTTCAATCTCGCCTTTATCATTGAAAGGAGTTAAAGCTGCCGGATATGAGAAAATGACTGTTGTGCAGGAGGCAACTCTTCCAGTAATTCTCAGAGGTAAGGACGTCCTTGCCAAGGCTAAAACAGGCACAGGAAAAACTGTTGCCTTTCTGCTTCCATCTATTGAAGTTGTTGTGAAGTCACCTCCAATTGAACGAGATCAAAAGCGACCTCCATTCCTTGTGCTTATCATATGCCCAACTCGGGAGCTTGCAAGTCAAGCTGCTGCGGAAGCCACTAAACTACTGAAGTACCACCCTTCCATTGGCGTTCAAGTTGTGATTGGAGGGACAAGACTTGCTTTGGAACAGAAACGCATGCAAGCTAACCCTTGCCAGATCCTTGTTGCCACTCCTGGAAGGCTTAGAGACCATATTGAGAATACAGCAGGCTTTGCAACTCGGCTGATGGGGGTGAAAGTCCTTGTGCTCGATGAAGCTGATCATCTACTAGACATGGGGTTTCGCAAAGACATTGAGAAGATAATTGCTGCAGTTCCTAAACAAAGACAAACTCTCATGTTTTCTGCCACCGTTCCAGAAGAGGTCCGTCAAGTCTGCCATATTGCATTGAGAAGGGATCAAGAATTTATCAATACAGTTGAAGAAGGTAGTGAGGAGACACATTCACAGGTTCAACAAATGCATTTAGTTGCACCATTAGACAAACATTTCTCCTTGCTCTATGTTCTTCTTAAGGAGCACATTGCAGACGATGTTGACTATAAGGTTCTTGTTTTCTGCACAACTGCCATGGTCACAAGACTTGTTGCTGACCTTCTTGGCGAGTTGAAAATGAATGTGAGAGAAATTCATTCAAGAAAGCCTCAGAGCTATAGAACCAGGGTCTCTGAGGAGTTTCGGAAGTCAAAGGGCCTTATCCTTGTAACTTCAGATGTATCTGCCCGCGGAGTAGATTATCCAGATGTCACTCTGGTTATACAGTTGGGTTTGCCAGCTGATAGAGAACAGTATATCCACCGACTGGGTCGCACAGGGCGGAAAGGTAAAGAAGGGCGAGGCGTATTGTTACTGGCTCCTTGGGAAGACTTCTTTTTATCTACCGTAAAGGATTTGCCTATTGCAAAAGCTCCAGTACCTTCAACGGATCCTGACACAAAGAAAAAGGTGGAAAGGGCGCTATCCCATGTGGAGATGAAGAACAAAGAAGCAGCATATCAGTCGTGGCTTGGTTACTACAATTCAAACAAGAAAGTGGGGAAAGACAAGCATAGGCTGGTGGAGCTTGCAAATGAATTCAGTAGAACCATGGGGATTGATAACCCTCCGGCTATTCCAAAGCTAGTCCTGGGCAAGATGGGCCTCAGAAATATACCTGGTTTACGTTCCAAATAG 2322 0.463 MPTKLLSQLHLIQASSFARFPSMKLGASIPTSRPVPIFSRIFPFRIKYLALESRALRNELLGVRRFSTRSFAGRDGSRSEFIRGNRDTERVRVSKSLIEDEAELSDWVDDLKTDSYRGRLTSEEDDSDRESSRSGGRSRAPVSMKGSRESGSSRFGEPTRRRTRDTFESFSRNSRMSRRFEDDDDEDGNEFRSSRSGRVSEGQSILGKRSGEESRGGRRDGRRKSYLMSVDDADEDEQGPKKCMGRFGDLISDEDSDAEDTADEYGDDDLLKKTLDSQMGREKELKKSSPTRGSPERSDNYLSETRFDQCSISPLSLKGVKAAGYEKMTVVQEATLPVILRGKDVLAKAKTGTGKTVAFLLPSIEVVVKSPPIERDQKRPPFLVLIICPTRELASQAAAEATKLLKYHPSIGVQVVIGGTRLALEQKRMQANPCQILVATPGRLRDHIENTAGFATRLMGVKVLVLDEADHLLDMGFRKDIEKIIAAVPKQRQTLMFSATVPEEVRQVCHIALRRDQEFINTVEEGSEETHSQVQQMHLVAPLDKHFSLLYVLLKEHIADDVDYKVLVFCTTAMVTRLVADLLGELKMNVREIHSRKPQSYRTRVSEEFRKSKGLILVTSDVSARGVDYPDVTLVIQLGLPADREQYIHRLGRTGRKGKEGRGVLLLAPWEDFFLSTVKDLPIAKAPVPSTDPDTKKKVERALSHVEMKNKEAAYQSWLGYYNSNKKVGKDKHRLVELANEFSRTMGIDNPPAIPKLVLGKMGLRNIPGLRSK 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g0202 773 MobiDBLite consensus disorder prediction 118 135 - -
Lele44g0202 773 Gene3D - 528 750 IPR027417 -
Lele44g0202 773 Pfam DEAD/DEAH box helicase 330 507 IPR011545 GO:0003676|GO:0005524
Lele44g0202 773 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 305 333 IPR014014 GO:0003724
Lele44g0202 773 PANTHER RNA HELICASE 283 703 - -
Lele44g0202 773 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 336 519 IPR014001 -
Lele44g0202 773 CDD SF2_C_DEAD 534 667 - -
Lele44g0202 773 SMART ultradead3 324 537 IPR014001 -
Lele44g0202 773 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 382 673 IPR027417 -
Lele44g0202 773 CDD DEADc_MSS116 312 521 - -
Lele44g0202 773 SMART helicmild6 577 658 IPR001650 -
Lele44g0202 773 MobiDBLite consensus disorder prediction 211 252 - -
Lele44g0202 773 MobiDBLite consensus disorder prediction 154 182 - -
Lele44g0202 773 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 553 700 IPR001650 -
Lele44g0202 773 MobiDBLite consensus disorder prediction 118 302 - -
Lele44g0202 773 Pfam Helicase conserved C-terminal domain 553 658 IPR001650 -
Lele44g0202 773 MobiDBLite consensus disorder prediction 266 302 - -
Lele44g0202 773 Gene3D - 268 520 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g0202 Lele-ChrLele44 1302731 1307778 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g0202 296 686 Eukaryotic Initiation Factors Gene Family AT3G19760 27.273 9.90e-45 164