Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g0192 ATGGAGGAAGGGCAATTTAGTCTGATCAATGAGCTAAACCAAGGGAAGGAGCTAGCAAGGCTGCTATGTAACCATATAGCATCTTCTTCTTCTTCATCTTCTCATGAGACGAATGAGCTCTTGATTGAGAAAATACTCTTTTCATATGAGAAAGCTCTGAAGATGCTTACAAGTGGAGAAAATGTGAGTGAGGCTAATCCCACCATTAATGCTGAGGTATTGGACCAAGAAGACAATCACAGAGATGTCTGCAAGAAAAGGAAGATCATGCCTAAATGGTCAGAAAAAGTGAAGGTTTGCTCAAGAACAGGGATTGAGGGTTCCTTAGATGATGGATATAGTTGGAGAAAATATGGCCAGAAGGACATCCTCGGAGCTAAATTTCCTAGAGGATACTACAGGTGCACTCATAGATTTTTACAAGGTTGTGAAGCAACAAAACAAGTTCAAAGGTCTGATGAAGATCCAACAATATTCGAGGTGACCTACAGAGGAAGGCATACCTGCAACAACCAGGCATATTTTAACAAGGCAGCATCATCATCATCGTCAAAGAAAAATAAGATGGGTTTTAGAGAGAACAACCATCATAATCATCAACAATACCATAAAAGAGAGGAGAAGGAGGAGGAAGGAGAGGAGAAGATGGAACAATCCCTTGTGACATTCTTCAATTTCGAACCAGAACTAGAAGTCAAAATGGACGACATTTTCCCGACATCGAGTGGATTTCCTTCGACATCCGATAATTACCAGTTCGTGGAAAACTTCATTTCCCCATCAACCTCGGAATCGAACCTTTTTTGTCTGTCACCGTGTCACATGGGAAGTGCAGGCATGGGCCAAAACGTGCAGAGTTCAGAATCTGAAGTGACCGACATAGTTTCAGCCCCAACCTCAGTCACCAATTCGCCTTTGGTGGATTTGGATGTCTTGTTTGAGAAGGAAGATTTTCAATCCACTTTCCCCTTCAACACTTTTGAATTTTTCTCTTCTTAG 999 0.4164 MEEGQFSLINELNQGKELARLLCNHIASSSSSSSHETNELLIEKILFSYEKALKMLTSGENVSEANPTINAEVLDQEDNHRDVCKKRKIMPKWSEKVKVCSRTGIEGSLDDGYSWRKYGQKDILGAKFPRGYYRCTHRFLQGCEATKQVQRSDEDPTIFEVTYRGRHTCNNQAYFNKAASSSSSKKNKMGFRENNHHNHQQYHKREEKEEEGEEKMEQSLVTFFNFEPELEVKMDDIFPTSSGFPSTSDNYQFVENFISPSTSESNLFCLSPCHMGSAGMGQNVQSSESEVTDIVSAPTSVTNSPLVDLDVLFEKEDFQSTFPFNTFEFFSS 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g0192 332 FunFam WRKY transcription factor 53 95 172 - -
Lele44g0192 332 MobiDBLite consensus disorder prediction 189 215 - -
Lele44g0192 332 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 7 263 IPR044810 GO:0003700
Lele44g0192 332 SUPERFAMILY WRKY DNA-binding domain 108 171 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele44g0192 332 Pfam WRKY DNA -binding domain 110 170 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele44g0192 332 Gene3D WRKY domain 93 171 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele44g0192 332 MobiDBLite consensus disorder prediction 179 215 - -
Lele44g0192 332 ProSiteProfiles WRKY domain profile. 104 172 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele44g0192 332 SMART WRKY_cls 109 171 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g0192 Lele-ChrLele44 1217987 1219713 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g0192 8 308 WRKY Transcription Factor Family AT2G46400 38.312 9.42e-49 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele44g0192 WRKY 1.1e-27 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0215 01 1226882 1228208 Lele44g0192 44 1217987 1219713 hybridization
Lele02g0213 02 1181149 1182048 Lele44g0192 44 1217987 1219713 hybridization