Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g0135 ATGGTGTCCGTGAACCCAAATCCAGCTCAAGGTTTTTACTTCTTCGATCCCATGAATACCGGTCTCAGTCACCCTCCACGGCGACTCCTGCCGCCCCCGACGGAGACTCCTGCCGCGGATGATCCGAACAAGAAGATCCGAAAACCGTATACGATTACTAAGTCCAGAGAGAACTGGTCCGAGCAGGAGCACGATAAGTTTCTCGAAGCTCTCCAATTATTCGACCGTGATTGGAAGAAGATTGAAGCATTTGTCGGGTCAAAAACTGTTATCCAGATAAGAAGTCATGCGCAGAAGTATTTTCTAAAAGTTCAGAAGAATGGGACTAGTGAACACGTGCCTCCTCCTCGGCCGAAGAGAAAAGCTGCTCATCCTTATCCACAAAAGGCCCCTAAAAATGCTGCATTGGTATCTCAAGGCACCGGACCAATGCAATCTTCAACCGCTTACGCTGAGCCAGCATACATTTATGGGCCAGATTCATTGTCCATGCTCGGAACACCGGTTACCAGTGTGCCTTTGTCATCCTGGAATTGCAATGCTACGCCGCCTGTCAGCATGCCACAAGTGGCTAAAGATGATATGGGATTGGTCGGGCAAGCCGTTCCTCGTAATTGTTGCTATAGCAGTAGCAATGAGAGCGGTCCCGGAGTTTGGCCTAATGATAGAAGTATAGAACAAGTGGACCAAGTATACTCACAACCTTTGTACCATCTGCCCCATGCAGTAATGCCAGATTTTGCACAAATCTATCGGTTCATCGGTAGTGTGTTTGATCCAAATGCAATTGATCATCTACAGACACTGAAAAAGATGGACCCAATAAATGTGGAAACAGTATTGTTGTTGATGAGAAACCTCTCCATCAATTTAACGAGTCCTAAGTTTAAGGATCATCAGAAGTTGCTTTCGTCGCATGATGTTGACCCCGGTAAGGCGAAGACCGGTGGTTTTTACAATGATCCACTGACTAACAAATCCGAAAGTGCTGTTCTGTCTGCTTAG 1005 0.4667 MVSVNPNPAQGFYFFDPMNTGLSHPPRRLLPPPTETPAADDPNKKIRKPYTITKSRENWSEQEHDKFLEALQLFDRDWKKIEAFVGSKTVIQIRSHAQKYFLKVQKNGTSEHVPPPRPKRKAAHPYPQKAPKNAALVSQGTGPMQSSTAYAEPAYIYGPDSLSMLGTPVTSVPLSSWNCNATPPVSMPQVAKDDMGLVGQAVPRNCCYSSSNESGPGVWPNDRSIEQVDQVYSQPLYHLPHAVMPDFAQIYRFIGSVFDPNAIDHLQTLKKMDPINVETVLLLMRNLSINLTSPKFKDHQKLLSSHDVDPGKAKTGGFYNDPLTNKSESAVLSA 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g0135 334 Gene3D - 58 106 - -
Lele44g0135 334 SMART sant 55 103 IPR001005 -
Lele44g0135 334 Pfam Myb-like DNA-binding domain 56 101 IPR001005 -
Lele44g0135 334 Coils Coil 332 334 - -
Lele44g0135 334 MobiDBLite consensus disorder prediction 23 48 - -
Lele44g0135 334 ProSiteProfiles SANT domain profile. 54 107 IPR017884 -
Lele44g0135 334 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 51 105 IPR017930 -
Lele44g0135 334 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 54 103 IPR006447 GO:0003677
Lele44g0135 334 MobiDBLite consensus disorder prediction 105 130 - -
Lele44g0135 334 SUPERFAMILY Homeodomain-like 50 106 IPR009057 -
Lele44g0135 334 CDD SANT 58 101 IPR001005 -
Lele44g0135 334 FunFam protein REVEILLE 6 isoform X1 58 106 - -
Lele44g0135 334 ProSiteProfiles Myb-like domain profile. 51 101 IPR001005 -
Lele44g0135 334 PANTHER SWI/SNF COMPLEX-RELATED 37 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g0135 Lele-ChrLele44 825660 827958 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele44g0135 Myb_DNA-binding 7.8e-11 CL0123