LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele44g0133	ATGTTATCATACGACGCAGCTTTTCTCGATAAAGAGCTTTCTAAACGCACCTCAATATTTGGACTACCGCTCTGGGTCGTGGTCGGAATCGTTGTTGGCGCCGTAATCGTCATCGCTCTCTTCCTCCTCTCCCTTTGCCTAATCTCTCGCCGACGCAGGCGCCGCCACAATCCAAAGAAGAATCACGATCCTAAAGTTGCTGGAACACCTGTTGTATCAAAGGAAATCCAGGAGATCATCCACCTACCTGGACCCAACCAGCACCACTCGCCACCGCTGGAGATCCATGCTGACATTGGAAAATCGGAGCACCGGGTTATGGTGTTTTCCGATCGGATTTCTAGTGGAGAGAGCAGGGGTACGGCCTTGAGTGCTTCCGAGGCGAGGTCGTCTTTTGGTGGTGGGAGTATCGGGCCAGAAGTCTCGCATCTGGGGTGGGGTAGATGGTACACTCTGAGAGAGCTTGAAGCTGCGACTAATGGATTGTGTGAAGAAAACGTGGTTGGGGAAGGTGGCTATGGAATAGTGTACAAAGGAGTACTCAGTGATGGGGCCAAGCTGAGAAAGAATTTAAAGTTGAGGATGCTTGTGTATGAGTATGTTGACAATGGCAATCTAGAACAGTGGCTTCATGGCGATGTTGGAGCTGTGAGCCCCCTGACGTGGAATATCCGTATGAACATCATACTGGGCACTGCAAAAGGATTGGCCTATCTTCATGAGGGTCTCGAACCGAAGGTTGTTCACCGAGATGTAAAGTCCAGCAACATACTCCTAGATCGCCAATGGAACTCAAAAGTTTCGGACTTTGGGCTTGCTAAGCTCTTGTGTTCTGAGAATAGTTATGTCACAACTCGAGTCATGGGCACATTTGGTTCTGATTGTTTTAACTGTGGAAACTGGAAAATCTTGCAGGTTAATTTAATAGATTGGTTAAAAACCATGGTTGGAAAGCGAAAAGCCGAGCAAGTAGTCGATCCTAAGCTCCCCGAGACGCCACCGTCAAAGGCTCTCAAGCGTGCGCTGCTGGTTGCTCTCCGATGTGTTGATCCTGATGCAACCAAGAGGCCTAAAATGGGGCATGTCATCCACATGCTTGAAGCAGATGACCTACTATTCCCTGTTAGCAGGGGAGAATCTTCGCATTCGAATCGTGATCTTAAAGAGAAGAAGGAATCGAATATAGATAAAAGAAGGAACGGAGAAGGGACCATTGATCAAAATGAAGCAGAGGATAGTAGTAGAAGTCATCATCAGCCAACTAGTAGGATTCGTATGAACATGAAAGAAGCAATAGTGGATAAGGATAAAAGCAAAAAGGATTGGATCAAAGATGACATGGCGACTTCATGGATGGAGGGTTGTGGGAAGAAGACAGGCAGGTTGGCCCGACAAGAACAAGTGTGTTGTCTGCAAATGTTTATCAGTAGTTTAGATTTCTTCCCAGTGGAAGGCAGTAGACGATGCAAAGAAGATGACAATCATTTGATTAGCGGTTGA	1500	0.4707	MLSYDAAFLDKELSKRTSIFGLPLWVVVGIVVGAVIVIALFLLSLCLISRRRRRRHNPKKNHDPKVAGTPVVSKEIQEIIHLPGPNQHHSPPLEIHADIGKSEHRVMVFSDRISSGESRGTALSASEARSSFGGGSIGPEVSHLGWGRWYTLRELEAATNGLCEENVVGEGGYGIVYKGVLSDGAKLRKNLKLRMLVYEYVDNGNLEQWLHGDVGAVSPLTWNIRMNIILGTAKGLAYLHEGLEPKVVHRDVKSSNILLDRQWNSKVSDFGLAKLLCSENSYVTTRVMGTFGSDCFNCGNWKILQVNLIDWLKTMVGKRKAEQVVDPKLPETPPSKALKRALLVALRCVDPDATKRPKMGHVIHMLEADDLLFPVSRGESSHSNRDLKEKKESNIDKRRNGEGTIDQNEAEDSSRSHHQPTSRIRMNMKEAIVDKDKSKKDWIKDDMATSWMEGCGKKTGRLARQEQVCCLQMFISSLDFFPVEGSRRCKEDDNHLISG	499

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele44g0133	499	Gene3D	Transferase(Phosphotransferase) domain 1	295	373	-	-
	Lele44g0133	499	Gene3D	Transferase(Phosphotransferase) domain 1	201	293	-	-
	Lele44g0133	499	MobiDBLite	consensus disorder prediction	381	419	-	-
	Lele44g0133	499	SMART	serkin_6	162	373	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele44g0133	499	FunFam	Os07g0541700 protein	201	290	-	-
	Lele44g0133	499	SUPERFAMILY	Protein kinase-like (PK-like)	146	367	IPR011009	-
	Lele44g0133	499	MobiDBLite	consensus disorder prediction	377	426	-	-
	Lele44g0133	499	PANTHER	OS01G0323000 PROTEIN	193	292	-	-
	Lele44g0133	499	Gene3D	Phosphorylase Kinase; domain 1	138	193	-	-
	Lele44g0133	499	Pfam	Protein kinase domain	194	289	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele44g0133	499	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	247	259	IPR008271	GO:0004672\|GO:0006468
	Lele44g0133	499	ProSiteProfiles	Protein kinase domain profile.	126	372	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele44g0133	Lele-ChrLele44	811358	814722	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele44g0133	134	367	Receptor kinase-like Gene Family	AT4G02010	34.098	5.26e-46	169

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_RLCK-V	Lele44g0133		Pkinase	5.3e-17	CL0016