Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g0112 ATGAAGAGTCCAACTTCCTATTCACGTCGCCGGAGCTCCGGCTCCGGCTACCGCACGCCAGACCACCGCTACGTCTACTCCTCCAGCTATGATTCCTCCGGGGTTAGCACCACCATCGTCAAGTCAAACTCCTCTAGAAACCCATTCGCGGCCGCCGCTAGATCGGTGGCTTCGGTTTTTGTTGCTTGCTTCACCCCACCGGATGAGAGTAACTCGAAGAGCTTCGTGGATTCTCAGGAGTTCAAAGCTTCATCTTCCTCCTCCGCTGTATCTGATTCTTTGGGAGCTGGTAGTCAGAGAAATGGACGAATCAGTTCAAGTTCATACAAGTCAACTCAGGGAAAAGATCCTAGATCTCTGAATTTCACCATGGAGGATATCTTCCAAGCCACAAGAAACTTCTCCCCTGCTTACAAGGTCGGTCAAGGTGGTTTTGGTACAGTGTACAAGGCAAGTTTCCAGGACGGAACTGTAGTTGCAGTAAAGCGTGCCAAGAAGAGTTTATATGAGAAACATTTGGGTTCTGAATTCCAAAGTGAGATCCAAACGTTATCACGGGTTGAACATTTGAATTTGGTCAAGTTCTATGGATATTTGGAGCAAGGAGATGAAAGAATTCTTGTTGTGGAGTATGTCCCAAATGGAACCCTTAGAGAGCATTTAGATTGCATTCGTGGGAACATTTTAGACCTTGCTTCTCGTCTAGACATTGCAATTGATGTGGCTCATTCTATCACCTATCTTCATATGTATACAGATCATCCTATTATTCATAGAGACATTAAATCCTCCAACATTCTTCTTACTGAAAATTTGCGAGCTAAGGTAGCAGACTTTGGTTTTGCTAGACAGGCACCTGACAGTGATTCTGGTGTGACTCATGTATCCACCCAAGTTAGAGGAACCGCTGGCTACTTGGATCCTGAATATCTCAGAACCTATCAACTCACTGAGAAGAGTGACGTCTATTCATTTGGTGTTTTACTCGTTGAACTTGTCACTGGTAGACGTCCCATTGAACCAAAATTTGAACTCAAGGAGCGAATCACTGCAAAATGGGCTATGAAGAAATTCATTGAGGGCAATGCCATATCGGTGTTGGACCCGAAACTAGATCACAATGTTGCAAATAACCTGGCGCTAGAAAAGATATTTGAACTGGCCTTGCAGTGTTTGGCACCTCGTAGACAAAGCAGGCCTAGTATGAAGAGATGTGCTGAGATCCTTTGGACCATCCGCAAGGATTACAGAGAGCTATCAGCTTCAGATTTTCGTTCATTTTCCTCTTCTTCCCAGAGGAGTGCGTCAATAAAGGAGTGA 1320 0.45 MKSPTSYSRRRSSGSGYRTPDHRYVYSSSYDSSGVSTTIVKSNSSRNPFAAAARSVASVFVACFTPPDESNSKSFVDSQEFKASSSSSAVSDSLGAGSQRNGRISSSSYKSTQGKDPRSLNFTMEDIFQATRNFSPAYKVGQGGFGTVYKASFQDGTVVAVKRAKKSLYEKHLGSEFQSEIQTLSRVEHLNLVKFYGYLEQGDERILVVEYVPNGTLREHLDCIRGNILDLASRLDIAIDVAHSITYLHMYTDHPIIHRDIKSSNILLTENLRAKVADFGFARQAPDSDSGVTHVSTQVRGTAGYLDPEYLRTYQLTEKSDVYSFGVLLVELVTGRRPIEPKFELKERITAKWAMKKFIEGNAISVLDPKLDHNVANNLALEKIFELALQCLAPRRQSRPSMKRCAEILWTIRKDYRELSASDFRSFSSSSQRSASIKE 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g0112 439 Gene3D Transferase(Phosphotransferase) domain 1 212 433 - -
Lele44g0112 439 PANTHER OS01G0750732 PROTEIN 34 433 - -
Lele44g0112 439 ProSiteProfiles Protein kinase domain profile. 134 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele44g0112 439 Pfam Protein kinase domain 138 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele44g0112 439 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 3 212 423 - -
Lele44g0112 439 CDD STKc_IRAK 140 409 - -
Lele44g0112 439 SUPERFAMILY Protein kinase-like (PK-like) 116 412 IPR011009 -
Lele44g0112 439 MobiDBLite consensus disorder prediction 25 41 - -
Lele44g0112 439 ProSitePatterns Serine/Threonine protein kinases active-site signature. 256 268 IPR008271 GO:0004672|GO:0006468
Lele44g0112 439 ProSitePatterns Protein kinases ATP-binding region signature. 140 166 IPR017441 GO:0005524
Lele44g0112 439 MobiDBLite consensus disorder prediction 1 41 - -
Lele44g0112 439 MobiDBLite consensus disorder prediction 88 118 - -
Lele44g0112 439 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 2 97 211 - -
Lele44g0112 439 Gene3D Phosphorylase Kinase; domain 1 95 211 - -
Lele44g0112 439 SMART serkin_6 134 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g0112 Lele-ChrLele44 672934 675246 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g0112 122 412 Receptor kinase-like Gene Family AT1G30570 43.986 1.98e-70 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Lele44g0112 Pkinase 9.4e-51 CL0016