Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele44g0111 | ATGGGAGGTTGCTGCTGCAGTGCCAGAAAACCTCATCTGCATGGAACGCCATGTCCACCGGCTTTGGAAGAGCATGAATCTTTAACTACTAATGCTGGTACTGCTGGTTCACTCACTGCCGGATTGCTGGTGAGTTTGGACCTTCAGGGGTCAACACCTGATGCTTTCCGGCCCCCTCCTGCACCATTGCCATATGATACGGTTTTGGGTTGTCCAGCATCAACTGATTCTGAGTCAGGCAGAGAAACAGTTAGTGTCAGTAGTTTTGCAACTTTAATTACATGTGAAGATATTGAAGACTCAGAATGCAAAGTTCAAGCTAATTCTATGCCTACGTCTCCAAGGAAGCCAGAATTAACAAAATCAAATGAATCTCATGTATTAGTGACAGAGGAAGAGGATGGTTGCCCAATTTGTCTTGAAGAATATGATGTTGAGAATCCTAAAACTCTGACCAAGTGTGAACACCACTTTCACCTATCTTGCATTCTTGAGTGGATGGAACGAAGTGACTCTTGTCCCATATGCGATCAGGAGATGATATTTGACCAGACATTGAATTAG | 564 | 0.4397 | MGGCCCSARKPHLHGTPCPPALEEHESLTTNAGTAGSLTAGLLVSLDLQGSTPDAFRPPPAPLPYDTVLGCPASTDSESGRETVSVSSFATLITCEDIEDSECKVQANSMPTSPRKPELTKSNESHVLVTEEEDGCPICLEEYDVENPKTLTKCEHHFHLSCILEWMERSDSCPICDQEMIFDQTLN | 187 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele44g0111 | 187 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 129 | 186 | IPR013083 | - | |
Lele44g0111 | 187 | SUPERFAMILY | RING/U-box | 130 | 183 | - | - | |
Lele44g0111 | 187 | MobiDBLite | consensus disorder prediction | 107 | 127 | - | - | |
Lele44g0111 | 187 | Pfam | Ring finger domain | 136 | 176 | IPR001841 | - | |
Lele44g0111 | 187 | PANTHER | ZINC FINGER, RING/FYVE/PHD-TYPE | 32 | 184 | - | - | |
Lele44g0111 | 187 | FunFam | Putative E3 ubiquitin-protein ligase RHB1A | 112 | 181 | - | - | |
Lele44g0111 | 187 | ProSiteProfiles | Zinc finger RING-type profile. | 136 | 177 | IPR001841 | - | |
Lele44g0111 | 187 | SMART | ring_2 | 136 | 176 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele44g0111 | Lele-ChrLele44 | 665241 | 667437 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele44g0111 | 1 | 187 | C3H Transcription Factor Family | AT4G00335 | 57.068 | 4.53e-71 | 212 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lele41g1286 | 41 | 21586587 | 21588743 | Lele44g0111 | 44 | 665241 | 667437 | hybridization | |
Lele42g1245 | 42 | 24527013 | 24529193 | Lele44g0111 | 44 | 665241 | 667437 | hybridization |