Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g0095 ATGGCTGTGGCGAGTCCTGCGCCTGCAGTTCCACGAAGCTTCAGTTCTGTGAGGTTGCCTCAAGATTTTGAGGTCACCGCCAGCAACATGGCCGGGATGGGAGAAATTGTAGAAGAGCCTAAACCAAGTGTGGTTGATGACACTATCTATATTGCTGTGACAAAAGATTTGAAAGAGAGCAAATCAAATCTGACATGGGCAATTCAAAACTCTGGAGGAAACAAGATTTGCGTCCTCCATGTTCATGTCCCTGCAACTATGATCCCCCTGATGGGCACTAAATTTCCCGCAAGTTCATTGAATAAAGAGGAAGTTGAAGCATACAAGGAACTTGAAAGGCAAAACATGCATAAGAATCTAAATGAGTATCTTCTATCCTGTTCACGAATGGGGGTCCGGGCAGAGAAGTTGCATTTGGAAATGGAATGCATTGAGAAAGGTATTGTAGAGCTTGTCTCTCAACATGGCATCCGTAAGCTTGTCATGGGGGCAGCATCTGATAATCGTCATTCTAGGAAAATGATGGACCTCAAATCTAAGAAAGCCATTTATGTGAGTGAACATGCTCCAGCTTATTGTCAAATACGGTTTGTCTGCAAAGGGCGCCTTATACACGCTAGAAATTGCTGCTTGGATGATGGTAATGAAGAGGTTGCATCACCTCTGCCACGGCGGAGGCCAAACCCTGAAGCTGTGCTTTCACTTCAGTTGAGGTCTCAATCTGTTACAATGGGGCAGAATACTAGGGAAAAGCTTGAGTTACTTCCCAGAGCAAGGTCTGCCATTTCTGGGCATGAAGGAAGAACGGTGACCTTGTCTTCTCCAGACTCTGAAGGGTTTTCCAGTCCAAGTAACAGATGGGGCACAGAAGTTGGTAGTAATGGGTCAGATGGGCTGTTAAGAAAGAGTCCTTTACTTTTCTCAACATGTCCTGAAAGTGGTGCTATTGAAGCAACATTGACTCCAAAATTGAATTCTGAGGGGAGTACTGAGAATTTAATAGACTCAAGTGAATTCTCTCCAGTTATAGCAAGTCTCCGCCGTTCATCTCCTCCTAGTGTACTGGATGGAGGAATAGATGACTCTCTCTACTATCACCTTGAACAAGCCATGTCTGAAGCTGAGAATGCTAGAAGGGAGGCCTTTCAAGAAACAGTTAAACGTGGGAAAGCTGAAAAAGATGCACTTGATGCTATGCGGAGGGCTAAGGCCTCGGAAAGCTTGTATAAAGAAGTGCTCAAACAAAGGAAACAAGTGGAGGAAGCACTAGAAAAAGAAAGAGGGGACCTTGAAGGGATGAAGAGCGAGAGTGACAAAGTTAAGGAAGAACTTAGACTTGCCCTAGATCAAAAACTGTCGTTGGAGAGTCAAATTGAATCATCTGAATTCATGGTAAGGGAGTTAGAACGGAAGATTATATCTGTCGTGGATCTGTTGACAACGTACAAGAAAGAAAGAGATGAGTTACAGATGCAGCGCAATGATGCATTGAAAGAGGCCGAGGAGTTGAGGAAAAAACAAGGAGAGGTTTCAAGCGTACATGAGCCTGAGGAGTTGTTTTCAGAGTTCTCTTTCCAAGAGATTGACCAAGCAACAAGGAACTTCGATCCATCCCTAAAGATTGGAGAAGGTGGATATGGAAATATATATAAAGCTACCTTGCGTCAAACTGAAGTGGCCATAAAGATGTTGCATGCAAACAACAACTCGCAAGGACCTGCAGAGTTTCAGCAGGAGAGTTTTCAAGTTGATCCTACTTATGATTTTGTATCAGGTGGTGATGATGATACGACAAATTGTTGGAGAACTGTTCCAAAGGGTACTTTAGTCTACATGGATCCTGAATTTCTTGCTACTGGAGATCTTACGCCGAAATCAGATGTTTATTCATTTGGTATCATATTATTAAGATTGTTGACTGGGAGACCAGCGTTGGGGATCACAAAGGAAGTTCAATATGCATTAGACACTGGAAAGTTTAAATCCCTGTTGGATCCTTTGACTGGAGGCTGGCCATTTGTGCAAGCTCAACAGTTGGCTCGTGTGGCTCTAAGGTGTTGTGAGTTGACACGGAAGAATCGGCCGGATCTTCGTTCAGATGAAATGATGCAAGATCCGCATATTGCAGCAGATGGATTTTCATATGAAGGTGAGGCAGTACGAGGATGGCTGGATAGTGATCATGACACGTCACCCATGACAAATGCAAAGCTTGAACATCGTAACAGTGTACCTAACCACACTCTTCGCTCTGCAATTCAGGACTGGCTCCAAAATCATCACTGA 2286 0.4392 MAVASPAPAVPRSFSSVRLPQDFEVTASNMAGMGEIVEEPKPSVVDDTIYIAVTKDLKESKSNLTWAIQNSGGNKICVLHVHVPATMIPLMGTKFPASSLNKEEVEAYKELERQNMHKNLNEYLLSCSRMGVRAEKLHLEMECIEKGIVELVSQHGIRKLVMGAASDNRHSRKMMDLKSKKAIYVSEHAPAYCQIRFVCKGRLIHARNCCLDDGNEEVASPLPRRRPNPEAVLSLQLRSQSVTMGQNTREKLELLPRARSAISGHEGRTVTLSSPDSEGFSSPSNRWGTEVGSNGSDGLLRKSPLLFSTCPESGAIEATLTPKLNSEGSTENLIDSSEFSPVIASLRRSSPPSVLDGGIDDSLYYHLEQAMSEAENARREAFQETVKRGKAEKDALDAMRRAKASESLYKEVLKQRKQVEEALEKERGDLEGMKSESDKVKEELRLALDQKLSLESQIESSEFMVRELERKIISVVDLLTTYKKERDELQMQRNDALKEAEELRKKQGEVSSVHEPEELFSEFSFQEIDQATRNFDPSLKIGEGGYGNIYKATLRQTEVAIKMLHANNNSQGPAEFQQESFQVDPTYDFVSGGDDDTTNCWRTVPKGTLVYMDPEFLATGDLTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKFKSLLDPLTGGWPFVQAQQLARVALRCCELTRKNRPDLRSDEMMQDPHIAADGFSYEGEAVRGWLDSDHDTSPMTNAKLEHRNSVPNHTLRSAIQDWLQNHH 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g0095 761 SUPERFAMILY Protein kinase-like (PK-like) 522 706 IPR011009 -
Lele44g0095 761 Gene3D Transferase(Phosphotransferase) domain 1 582 700 - -
Lele44g0095 761 CDD Prefoldin 410 506 - -
Lele44g0095 761 SMART serkin_6 535 708 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele44g0095 761 PANTHER OS02G0152300 PROTEIN 49 579 - -
Lele44g0095 761 Pfam U-box domain 700 760 IPR003613 GO:0004842|GO:0016567
Lele44g0095 761 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 59 174 - -
Lele44g0095 761 Gene3D HUPs 48 192 IPR014729 -
Lele44g0095 761 ProSiteProfiles Protein kinase domain profile. 328 708 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele44g0095 761 MobiDBLite consensus disorder prediction 728 745 - -
Lele44g0095 761 MobiDBLite consensus disorder prediction 264 289 - -
Lele44g0095 761 CDD RING-Ubox_WDSUB1_like 699 735 - -
Lele44g0095 761 ProSiteProfiles U-box domain profile. 699 761 IPR003613 GO:0004842|GO:0016567
Lele44g0095 761 Coils Coil 479 506 - -
Lele44g0095 761 CDD STK_N 48 201 - -
Lele44g0095 761 Coils Coil 409 471 - -
Lele44g0095 761 SUPERFAMILY RING/U-box 701 760 - -
Lele44g0095 761 Gene3D Phosphorylase Kinase; domain 1 513 581 - -
Lele44g0095 761 MobiDBLite consensus disorder prediction 266 289 - -
Lele44g0095 761 ProSitePatterns Protein kinases ATP-binding region signature. 541 562 IPR017441 GO:0005524
Lele44g0095 761 Coils Coil 367 387 - -
Lele44g0095 761 SMART Ubox_2 696 756 IPR003613 GO:0004842|GO:0016567
Lele44g0095 761 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 701 761 IPR013083 -
Lele44g0095 761 MobiDBLite consensus disorder prediction 725 745 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g0095 Lele-ChrLele44 551725 556564 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g0095 1 760 U-box Gene Family AT2G45910 34.525 8.27e-138 425
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Lele44g0095 U-box 2.3e-12 CL0229