Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g0082 ATGGATCGGGGGGACCAAATGGCGTTATCTGGGTCTGCATCTTACTATATGCAGAGGGGAATAGCTGGTTCTGCCGGACAGCCTGAGCTTCATGGTTCCCCAACTATTCACCAACTTTCTAATTCCAATCTATCATTTCAACCCAGCATTGGGGGCGCTCCGTCTGGAGTGCAATCTGGGGAACCTGTCAAAAGGAAGAGAGGAAGGCCGAGGAAATATGGTCCAGATGGAACTGTTTCTTTGGCATTGACTCCAATGTCGTCTAGTCATCCCGGAAGTGGTCATTCTGGGAGTAGAACTGTGACACAGAGCCATAAGAGGGGTAGAGGGCGCCCCCCTGGGTCTGGCAAGAAACAGCAGTTGGCTTCTCTTGGTGAATTGATGTCTGGTTCAGCTGGAATGGGTTTCACTCCTCATATCATCACCATTGCAGTTGGAGAAGATATTGTGTCAAAAATAATGGCATTCTCCCAGCAAGGGTCTAGAGCCGTGTGTGTATTGTCTGCCAATGGTGCTGTTTCAAATGCGACCCTCTGTCAGCCTTCAACTTTGGGTGGTTCTGTCACATATGAGGGGCGTTATGAGATATTGTGCCTGTCAGGCTCTTACTTGCTTAATGAAAGTGGAGGCTCCCGCAATCGAACTGGTGGATTGAGTGTCTCTCTTGCTAGTCCCGAGGGCAAAATCATTGGTGGAGGAGTTGGTGGAATGCTTATTGCAGCATGTCCTGTTCAGGTGATAGTAGGGAGCTTTTTATGGGGTGGATCGAAGACCAAGAACAAGAAAAAAGAAGTTGAAGTTCCCGTGGATTCGGATCATCAGAATCGTCAGGATCATCAGAATCGTCAGGATCATCAGGCAGTTCATAATCCAGTAGCTATGAATAACATTATGGCCAATCAGAATCTCACCCAACCATCTTCTATGGGTACATGGCCGGTATCTCGTACGATGGATATTCGCAATTCCCATGTTGACATCGACTTAATGCGCGGGTGA 999 0.4805 MDRGDQMALSGSASYYMQRGIAGSAGQPELHGSPTIHQLSNSNLSFQPSIGGAPSGVQSGEPVKRKRGRPRKYGPDGTVSLALTPMSSSHPGSGHSGSRTVTQSHKRGRGRPPGSGKKQQLASLGELMSGSAGMGFTPHIITIAVGEDIVSKIMAFSQQGSRAVCVLSANGAVSNATLCQPSTLGGSVTYEGRYEILCLSGSYLLNESGGSRNRTGGLSVSLASPEGKIIGGGVGGMLIAACPVQVIVGSFLWGGSKTKNKKKEVEVPVDSDHQNRQDHQNRQDHQAVHNPVAMNNIMANQNLTQPSSMGTWPVSRTMDIRNSHVDIDLMRG 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g0082 332 MobiDBLite consensus disorder prediction 31 54 - -
Lele44g0082 332 MobiDBLite consensus disorder prediction 262 285 - -
Lele44g0082 332 SUPERFAMILY AF0104/ALDC/Ptd012-like 136 253 - -
Lele44g0082 332 FunFam AT-hook motif nuclear-localized protein 1-like 138 268 - -
Lele44g0082 332 CDD DUF296 137 251 IPR005175 -
Lele44g0082 332 Pfam Plants and Prokaryotes Conserved (PCC) domain 138 251 IPR005175 -
Lele44g0082 332 ProSiteProfiles PPC domain profile profile. 132 275 IPR005175 -
Lele44g0082 332 MobiDBLite consensus disorder prediction 81 101 - -
Lele44g0082 332 SMART AT_hook_2 106 118 IPR017956 GO:0003677
Lele44g0082 332 SMART AT_hook_2 64 76 IPR017956 GO:0003677
Lele44g0082 332 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 45 307 IPR039605 GO:0003680
Lele44g0082 332 MobiDBLite consensus disorder prediction 24 121 - -
Lele44g0082 332 Gene3D - 138 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g0082 Lele-ChrLele44 450434 455968 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g0082 1 332 AT-hook Motif Nuclear Localized (AHL) Family AT3G61310 47.709 2.88e-87 265