Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele44g0072 | ATGAACGATAGAGCTAGATATCCACCTGGGATTGGCGTAGGTCGAGGAGGAGGTATGAACTCGAACCCTGCGTTTCAACCGCGACCTCATCAGCAACAGTATGTGCAAAGGCATTTAGTGCAGAATCAACAGCAGTATCAACATCAGTATCAGCATCCTCAACAGCAACATCAGCAGTTACAACAGCAGCAGCAACAACAATGGCTTAGAAGAACGCAATTGAGTGGTGCTGATTCTAACGTAGTTGACGAGGTCGAGAAGACTGTGCAGTCTGAAGCCGTTGATTCAAGTTCTCAAGATTGGAAAGCAAGATTAAAGATACCACCGCCTGATACTCGCTATAGGACTGAGGATGTGACAGCAACTAAAGGAAATGAATTTGAAGATTACTTTTTGAAGCGTGAGCTGCTTATGGGAATATATGAGAAGGGTTTTGAAAAGCCTTCTCCTATTCAGGAAGAAAGTATCCCAATTGCTCTTACTGGTAGTGACATTCTTGCTAGAGCAAAAAATGGAACGGGAAAAACAGCTGCATTTTGCGTTCCTGCACTAGAAAAAATTGATCAGGATAACAATGTTATTCAAGTTGTTATACTGGTCCCAACACGTGAATTGGCTTTGCAAACATCACAAGTGTGTAAAGAGCTGGGAAAGCATCTGAAAATTCAAGTCATGGTTACAACGGGTGGTACCAGCCTGAAAGATGATATCATGCGTTTATATCAACCTGTTCATTTACTTGTTGGAACTCCAGGAAGAATCTTAGATCTTGCAAAGAAGGGTGTCTGCATTTTGAAAGACTGTAGTATGCTTGTTATGGATGAGGCTGATAAGCTTTTGTCACCAGAATTCCAACCTTCGATAGGGCAATTGGTTCATTTCCTGCCTCCAAACCGTCAAATCCTGATGTTTTCAGCTACTTTTCCTGTTACCGTAAAGGACTTCAAAGATAGATTTCTTCGAAAACCGTATATCATTAACCTTATGGATGAGTTAACTCTGAAAGGTATTACACAATTTTATGCATTCGTGGAAGAGAGACAGAAAGTCCACTGTCTCAATACACTTTTCTCTAAGCTGCAAATAAACCAGTCAATTATCTTCTGCAATTCGGTGAATCGGGTTGAGCTCCTTGCCAAGAAAATCACAGAACTTGGCTATTCATGCTTCTATATCCATGCAAAGATGTTGCAAGATCATCGTAACAGAGTATTTCATGACTTCCGCAATGGTGCTTGTAGAAATCTTGTTTGTACTGATCTTTTTACCAGGGGAATAGACATTCAAGCAGTTAATGTGGTCATTAATTTTGATTTTCCCAAGAATTCAGAAACTTATCTGCACAGGGTTGGTCGTTCAGGGAGGTTTGGGCACCTTGGTCTAGCAGTTAACCTAATCACCTATGAGGATCGTTTTAATTTATATAGGATTGAGCAAGAACTTGGCACTGAAATAAAGCAAATTCCACCGCATATTGATCAGGCAATTTATTGCCGGTGA | 1500 | 0.4073 | MNDRARYPPGIGVGRGGGMNSNPAFQPRPHQQQYVQRHLVQNQQQYQHQYQHPQQQHQQLQQQQQQQWLRRTQLSGADSNVVDEVEKTVQSEAVDSSSQDWKARLKIPPPDTRYRTEDVTATKGNEFEDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTAAFCVPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLAKKGVCILKDCSMLVMDEADKLLSPEFQPSIGQLVHFLPPNRQILMFSATFPVTVKDFKDRFLRKPYIINLMDELTLKGITQFYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHIDQAIYCR | 499 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele44g0072 | 499 | FunFam | ATP-dependent RNA helicase DDX6 | 106 | 329 | - | - | |
Lele44g0072 | 499 | Gene3D | - | 330 | 499 | IPR027417 | - | |
Lele44g0072 | 499 | MobiDBLite | consensus disorder prediction | 1 | 62 | - | - | |
Lele44g0072 | 499 | Pfam | Helicase conserved C-terminal domain | 351 | 457 | IPR001650 | - | |
Lele44g0072 | 499 | FunFam | ATP-dependent RNA helicase DDX6 | 330 | 499 | - | - | |
Lele44g0072 | 499 | CDD | SF2_C_DEAD | 337 | 466 | - | - | |
Lele44g0072 | 499 | CDD | DEADc_DDX6 | 127 | 327 | - | - | |
Lele44g0072 | 499 | ProSiteProfiles | Superfamilies 1 and 2 helicase C-terminal domain profile. | 336 | 496 | IPR001650 | - | |
Lele44g0072 | 499 | PANTHER | DEAD-BOX ATP-DEPENDENT RNA HELICASE 50 | 61 | 498 | - | - | |
Lele44g0072 | 499 | Gene3D | - | 83 | 329 | IPR027417 | - | |
Lele44g0072 | 499 | MobiDBLite | consensus disorder prediction | 24 | 62 | - | - | |
Lele44g0072 | 499 | SMART | ultradead3 | 144 | 340 | IPR014001 | - | |
Lele44g0072 | 499 | Pfam | DEAD/DEAH box helicase | 150 | 314 | IPR011545 | GO:0003676|GO:0005524 | |
Lele44g0072 | 499 | ProSitePatterns | DEAD-box subfamily ATP-dependent helicases signature. | 272 | 280 | IPR000629 | - | |
Lele44g0072 | 499 | SMART | helicmild6 | 376 | 457 | IPR001650 | - | |
Lele44g0072 | 499 | ProSiteProfiles | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 156 | 326 | IPR014001 | - | |
Lele44g0072 | 499 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 195 | 479 | IPR027417 | - | |
Lele44g0072 | 499 | ProSiteProfiles | DEAD-box RNA helicase Q motif profile. | 125 | 153 | IPR014014 | GO:0003724 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele44g0072 | Lele-ChrLele44 | 416902 | 421361 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele44g0072 | 125 | 496 | Eukaryotic Initiation Factors Gene Family | AT3G19760 | 39.037 | 1.32e-96 | 296 |