Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g0046 ATGATGCGACGGCTGAAGAGCATTGCTTCTGGGCGGACTTCCATTTCGTCAGATCCTGGAGGGGATTCTAACACCAAGAGAGCTAAGTTTGATCAAGAAACTGAAGGAAGAGTCATTAAGGAGACAAATCCTGTTGAGAGAGGCAGCACACATATGGAGCAGCATGTTTATGCTCCAGGGGATACTACTGTAGGCACATCCAATGCATCCACGGTGGATAGAACGGAGAAATCTGGTTATGAGAAGCTTCCTAAAGAATTGAATGAAATGAAAATTAGAGATGAGAAAGGCAACAACCGCAATGAAAAGGATATGGAGCCAGCTATTGTGAATGGTAATGGAACTGAAACAGGGCAGGTAATTACAACAGCCATCGGTGGTCGTGATGGACAACCAAAGCAGACCATATCATACATGGCGGAGCGTGTGGTTGGTACCGGTTCCTTTGGTGTTGTTTTTCAGGCTAGGTGCCTTGAAACTGGTGAAACAGTTGCCATAAAGAAGGTTTTGCAAGACAAGAGATATAAGAATAGGGAACTACAGGTTATGCGCATGCTTGACCATCCCAATGTTATTCAACTAAAGCACTGCTTTTTTTCAACTACTGAAAAAGATGAGTTGTACCTGAACCTGGTTTTGGAGTATGTATCAGAAACCGTCTACAGAATTTCAAAGCACTATATCAGAATGCATCAACACATGCCTATAATTTATATACAACTGTATACATACCAGATATGCCGTGCATTAAACTATCTACATCATGTACTTGGCGTTTGCCACCGTGACATCAAACCACAGAATTTATTGGTTAATCCCCATACTCATCAGCTGAAGATCTGTGATTTTGGAAGCGCAAAGATGCTGGTGCCTGGTGAACCCAACATATCATATATATGCTCACGGTATTATAGAGCACCTGAACTCATATTTGGGGCAACTGAATACACAAATGCTATTGATATGTGGTCTGTTGGTTGTGTTTTGGCTGAGCTCCTTCTAGGACAGCCAATGTTCCCCGGGGAGAGTGGAGTTGATCAGTTGGTGGAAATCATTAAGATATTGGGGACACCGACCAGAGAAGAAATAAAGTGCATGAATCCAAATTACTCTGAATTCAAGTTTCCTCAGATTAAAGCACACCCATGGCACAAGGTTTTCCACAAGAGAATGCCTTCAGAAGCTGTTGATCTTGTGTCAAGGCTGCTCCAGTATTCACCTAATCTACGGTGCACTGCTTTGGAAGCATGTGCACACCCCTTCTTCAATGATCTAAGAGACCCAAATGTATGCTTTCCAAACGGGCGACCTCTGCCTCCTTTGTTTGACTTTACAGCACAAGAGTTGGCTGGTGCATCTACTGAGTTGCGTCATCGACTCATTCCCGAACATGCAAGGAGCTGA 1404 0.4345 MMRRLKSIASGRTSISSDPGGDSNTKRAKFDQETEGRVIKETNPVERGSTHMEQHVYAPGDTTVGTSNASTVDRTEKSGYEKLPKELNEMKIRDEKGNNRNEKDMEPAIVNGNGTETGQVITTAIGGRDGQPKQTISYMAERVVGTGSFGVVFQARCLETGETVAIKKVLQDKRYKNRELQVMRMLDHPNVIQLKHCFFSTTEKDELYLNLVLEYVSETVYRISKHYIRMHQHMPIIYIQLYTYQICRALNYLHHVLGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPGEPNISYICSRYYRAPELIFGATEYTNAIDMWSVGCVLAELLLGQPMFPGESGVDQLVEIIKILGTPTREEIKCMNPNYSEFKFPQIKAHPWHKVFHKRMPSEAVDLVSRLLQYSPNLRCTALEACAHPFFNDLRDPNVCFPNGRPLPPLFDFTAQELAGASTELRHRLIPEHARS 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g0046 467 FunFam Glycogen synthase kinase-3 beta 122 217 - -
Lele44g0046 467 ProSitePatterns Protein kinases ATP-binding region signature. 144 168 IPR017441 GO:0005524
Lele44g0046 467 SUPERFAMILY Protein kinase-like (PK-like) 137 448 IPR011009 -
Lele44g0046 467 ProSitePatterns Serine/Threonine protein kinases active-site signature. 259 271 IPR008271 GO:0004672|GO:0006468
Lele44g0046 467 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 102 466 - -
Lele44g0046 467 Pfam Protein kinase domain 138 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele44g0046 467 Gene3D Phosphorylase Kinase; domain 1 123 217 - -
Lele44g0046 467 FunFam Shaggy-related protein kinase kappa 218 466 - -
Lele44g0046 467 MobiDBLite consensus disorder prediction 9 23 - -
Lele44g0046 467 CDD STKc_GSK3 133 425 IPR039192 -
Lele44g0046 467 MobiDBLite consensus disorder prediction 24 47 - -
Lele44g0046 467 Gene3D Transferase(Phosphotransferase) domain 1 218 466 - -
Lele44g0046 467 ProSiteProfiles Protein kinase domain profile. 138 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele44g0046 467 MobiDBLite consensus disorder prediction 1 47 - -
Lele44g0046 467 SMART serkin_6 138 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g0046 Lele-ChrLele44 276620 280744 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g0046 144 425 Core Cell Cycle Gene Families AT1G76540 36.610 5.00e-56 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Lele44g0046 Pkinase 3e-66 CL0016