Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g0038 ATGGCAATGCATGCAGAATCTGGCTATCTGCCACCCAAAAAGTTAAAAAGGCGCATCGCAGCAATTTTCAGATCCCAAGTCATTCAAGGGAATATAGAGAGAAGGAGAAGGAGATGGAGAGAGAGTGACGAGTTTGCAAGAGTCAACCGACCCTTTTTGGATCATTATATTTGTAAGGCTTCGAAGACTCCACATGTCTCAGGGGAACCGGTTCATATTTTGGCTCGAAAATTTCCGGGTTTGAAGCTAATCGTGGAACAAGGCATATCAATTGCAGCGTACTTGTGTAGAAAGAGAATCGAAGAAGCTTTTCCTTTGATGAGTTTTGTGGGTTTTCCAGATATTCCTTCCTATAGTAGCAACGATTCTGCTAGAATGCCCTCTGGTGCAATCTCACAGCCTCGCCTTCTCACTTCCACTCCCATAGCTAAAACCACGTTCAACTCTACTGGCCTCTCACTTGCCCTTCAAACGGACATAGACGGGCAAAGGGATGGACATAGAATGTCTGAGAATTACGAGATGAATGTTAATGGGAGACGAAGCAGAGAAGAAGAGCAAGAAAGCAGATCTGGAAGTGATAACTTGGAAGTTGCTTCCGGCGACGATGAAGACCCCTCCGATCACCCTCCCAGGAAAAAGCGTTATCACCGACACACCCCTCAACAGATACAAGAGCTTGAAGCTTTGTTCAAGGAATGTCCTCATCCAGATGAGAAGCAGAGATTGGAACTGAGCAAGAGGCTTTGTTTGAAAACGAGGCAAGTGAAATTTTGGTTCCAGAATAGAAGAACTCAGATGAAGACCCAATTGGAACGCCATGAGAATACACTGCTTAGGCAAGAGAATGACAAGCTTAGAGTTGAGAACATGTCCATTAGGGACGCCATGAGGAACCCCATTTGCTCAAACTGTGGGGGACCAGCTATAATGGGAGAAATTTCACTGGAGGAACAGCATCTTCGGGTCGAAAATGCCCGGTTAAAGGACGAGTTGGACCGGGTTTGTGCCCTCGCCGGCAAGTTCCTCGGCCGCCCAGTTTCTTCATATCCGAACTCAATATTGGCAAACTCAAGTTTGGAGCTAGGAGTTGGAAGCGATGGCTTTGGTGGTATAAGCACTGTGCCTGCAACGTTGCCCATGGGGCCTGACTTGGGTGTGGGAATTTCTAGCCCATTAGCCATGGGAACTCCTCCTCATCCTGCTCCGGCCAGACCGGCCGGGCTCGATAGATCACTAGAGAGGTCCATGTTTCTAGAGCTTGCTTTGGCAGCCATGGATGAATTGGTGAAGATGGCTCAAAGTGATGAGCCTCTATGGATGAGGAGTTTGGAAGGTGGAAGAGAAATCCTCAACCATGAGGAGTACTCAAGGACTTTCACAGCTTGCATTGGCTTAAAACCTAAGGGCTTTGTGTCCGAAGCCTCAAAGGAGACTGGAATGGTCATCATAAACAGCTTGGCCCTTGTTGAAACTCTGATGGACTCGAATCGTTGGGCAGAGATGTTCCCTTGTATGATTGCAAGGACTTCCCCCACTGAAGTAATATCTGGTGGAATAAATGGGACCAGAAATGGTGCTCTTCAACTAATGCATGCTGAGCTGCAAGTTCTATCGCCGTTGGTGCCGGTTCGGGAGGTCAATTTCCTCCGGTTCTGCAAGCAGCATGCGGAGGGAGTGTGGGCTATTGTGGATGTGTCCATTGATACTGTCCGGGAAACTTCTGGTGCGCCACCTTTTGTGAAGTGTAGGAGGCTTCCTTCAGGCTGTCTAGTTCAAGACATGCCTAATGGTTACTCCAAGGTGACATGGGTGGAGCATGCAGAGTACGATGAAAGGCAAGTTCACGAGCTGTATAGAGGCATGTTAAGTTCAGGCTTGGCTTTTGGCGCGCAACGCTGGATTGCCACCCTTCAGCGTCAATGCGAATGCCTCGCCATTTTAATGTCTTCATCACTTCCTTCTAGAGACCAATCTGCGATTACTGCCGGCGGGCGGAGGAGCATGCTGAAGCTAGCGCAGCGCATGACTAACAACTTTTGCGCCGGCGTTTGTGCCTCGACTGTGCACAAGTGGAACAAGCTCAACAACGTTGGTGAGGATGTGCGGGTCATGACTCGCAAGAGCATCGACGATCCAGGGGAACCGCCGGGGATCGTGCTGAGCGCGGCCACGTCAGTGTGGCTGCCGGTATCGCCGCAGCGGCTGTTCGATTTCCTCCGTGACGAACGGCTCCGGAGCGAGTGGGACATACTGTCGAACGGCGGTCCCATGCAGGAGATGGCCCACATTGCCAAGGGCCAAGGCCACGGCAACTGCGTCTCCCTCCTCAGAGCCAGCGCCATGGATTCGAGCCAGAGCAGCATGCTAATATTGCAGGAGACATGCATCGACGCGGCGGGGGCGCTCGTTGTGTACGCGCCGGTGGACATTCCGGCGATGCACTTGGTCATAAACGGTGGCGATTCGGCTTACGTGGCGTTACTCCCGTCGGGGTTCGTGATCGTGCCAGACGGGTCTGGGTCGCGTGGGTCGCAAACGCCGGTCGGCAGAGCGAGTGGGTCACTCCTAACGGTGGCGTTTCAGATACTGGTGAACAGCCTGCCGACGGCGAAGCTGACGGTAGAGTCAGTGGAGACGGTGAACAACCTCATCTCTTGTACGGTGCAGAAGATAAAGGCCGCGCTTCCTGGTGAAAGTCGAGTCACGTGA 2712 0.5159 MAMHAESGYLPPKKLKRRIAAIFRSQVIQGNIERRRRRWRESDEFARVNRPFLDHYICKASKTPHVSGEPVHILARKFPGLKLIVEQGISIAAYLCRKRIEEAFPLMSFVGFPDIPSYSSNDSARMPSGAISQPRLLTSTPIAKTTFNSTGLSLALQTDIDGQRDGHRMSENYEMNVNGRRSREEEQESRSGSDNLEVASGDDEDPSDHPPRKKRYHRHTPQQIQELEALFKECPHPDEKQRLELSKRLCLKTRQVKFWFQNRRTQMKTQLERHENTLLRQENDKLRVENMSIRDAMRNPICSNCGGPAIMGEISLEEQHLRVENARLKDELDRVCALAGKFLGRPVSSYPNSILANSSLELGVGSDGFGGISTVPATLPMGPDLGVGISSPLAMGTPPHPAPARPAGLDRSLERSMFLELALAAMDELVKMAQSDEPLWMRSLEGGREILNHEEYSRTFTACIGLKPKGFVSEASKETGMVIINSLALVETLMDSNRWAEMFPCMIARTSPTEVISGGINGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAIVDVSIDTVRETSGAPPFVKCRRLPSGCLVQDMPNGYSKVTWVEHAEYDERQVHELYRGMLSSGLAFGAQRWIATLQRQCECLAILMSSSLPSRDQSAITAGGRRSMLKLAQRMTNNFCAGVCASTVHKWNKLNNVGEDVRVMTRKSIDDPGEPPGIVLSAATSVWLPVSPQRLFDFLRDERLRSEWDILSNGGPMQEMAHIAKGQGHGNCVSLLRASAMDSSQSSMLILQETCIDAAGALVVYAPVDIPAMHLVINGGDSAYVALLPSGFVIVPDGSGSRGSQTPVGRASGSLLTVAFQILVNSLPTAKLTVESVETVNNLISCTVQKIKAALPGESRVT 903
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g0038 903 SMART HOX_1 211 274 IPR001356 GO:0003677
Lele44g0038 903 ProSiteProfiles START domain profile. 411 647 IPR002913 GO:0008289
Lele44g0038 903 SMART START_1 420 644 IPR002913 GO:0008289
Lele44g0038 903 MobiDBLite consensus disorder prediction 161 220 - -
Lele44g0038 903 Pfam Homeodomain 213 268 IPR001356 GO:0003677
Lele44g0038 903 ProSiteProfiles 'Homeobox' domain profile. 210 270 IPR001356 GO:0003677
Lele44g0038 903 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 209 896 IPR042160 -
Lele44g0038 903 SUPERFAMILY Bet v1-like 665 886 - -
Lele44g0038 903 Coils Coil 264 291 - -
Lele44g0038 903 MobiDBLite consensus disorder prediction 177 192 - -
Lele44g0038 903 SUPERFAMILY Bet v1-like 413 644 - -
Lele44g0038 903 CDD START_ArGLABRA2_like 415 643 - -
Lele44g0038 903 SUPERFAMILY Homeodomain-like 199 270 IPR009057 -
Lele44g0038 903 FunFam Homeobox-leucine zipper protein HDG1 200 286 - -
Lele44g0038 903 ProSitePatterns 'Homeobox' domain signature. 245 268 IPR017970 GO:0000981|GO:0006355
Lele44g0038 903 CDD homeodomain 212 270 IPR001356 GO:0003677
Lele44g0038 903 FunFam Homeobox-leucine zipper protein GLABRA 2 420 643 - -
Lele44g0038 903 Gene3D - 488 642 IPR023393 -
Lele44g0038 903 Pfam START domain 420 644 IPR002913 GO:0008289
Lele44g0038 903 Gene3D - 199 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g0038 Lele-ChrLele44 239851 247584 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g0038 136 900 Homeobox Transcription Factor Family AT3G61150 66.540 0.0 1017
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lele44g0038 START 2.8e-56 CL0209