Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele44g0018 | ATGGATACAGTTAGGCTCGCAAGGAGAAGTGAGGTCCCTTCTTACTGGGACGCTCGTCGCGACTACTGGGTTGCAGGGCCACACAGCAATAAGCCCCCCAAAACCCCTGCTTATCGTAACAAGGCTCCTAAGAATGAAGCAGATCCCAAACGCAATTCATCTCAAATCTGCAAATATTGGATCAATGGAAACTGCGTCCACGGCGATCGCTGTTGGTACTTGCATTCCTGGTTTCAGGCCCCTTCCCTTTCTCTACTCACTAAGCTCCATCAACACAAGAAGATTGTCACCGGGATCACCCTTCCGGTTGGATCGGACAGACTTTTTTCTAGTAGCACTGATGGGACACTTCGGGTGTGGGACTGCCACACGGGTCAATGCGTCCATGTAATAAATCTGGGCGAAGAAGCAAGGTCTTTGATCAGCGCGGGTTCTTGGGTTTTTGCCGGTTTGCGCAATTCTATCAAGGTCAAAGCCCTTGCACTTACGGCTGCTGAGATCACTCTTGATGGACCTAAGGGTCCTGTCCTTTCCATGGCTGTTTGCAACGATACACTTTTTGCTGGTGCCATGGATGGCGTTATTTATGCATGGAGATGCAGCTCAGAAGTGAATTCCCCTTTTAAACAGTTGGCAACGTTGAATGGCCACACCAGAGCCGTTTCTTCCTTAACTGGCGGACCTGGGCACAAGCTCTACTCAGGTTCCATGGATCATAGCGTCAAGGTTTGGGACCTCGACACATTACAATGCACAATGACGTTGAAAGGGCACACTGATGTGGTGACATCCCTTATTTTCTGGGACCAATACCTGTTCTCAAGTTCTTTGGACGGCACAGTAAAGGGTGTGGTTAAAATCAACGGCATGATTGATGCGGAAGGGAAATCCGTTTTGTTTTGCTCGTGCAACAACCATTCTGTTGGGCTCTATGAAATGCCATCGTTTGCTGCAAGAGGAAGATTGTTCTCAAAACAAGAGGTTCGAGTAATAGAAGAAGGCCCCGGCAGACAATTCTTCACTGGAGACGGCACCGGTTTGCTCACCGTCTGGCAATGGCTACCTCACTCCTCCGAGGCCAACCCCACATCTTCATAG | 1098 | 0.4945 | MDTVRLARRSEVPSYWDARRDYWVAGPHSNKPPKTPAYRNKAPKNEADPKRNSSQICKYWINGNCVHGDRCWYLHSWFQAPSLSLLTKLHQHKKIVTGITLPVGSDRLFSSSTDGTLRVWDCHTGQCVHVINLGEEARSLISAGSWVFAGLRNSIKVKALALTAAEITLDGPKGPVLSMAVCNDTLFAGAMDGVIYAWRCSSEVNSPFKQLATLNGHTRAVSSLTGGPGHKLYSGSMDHSVKVWDLDTLQCTMTLKGHTDVVTSLIFWDQYLFSSSLDGTVKGVVKINGMIDAEGKSVLFCSCNNHSVGLYEMPSFAARGRLFSKQEVRVIEEGPGRQFFTGDGTGLLTVWQWLPHSSEANPTSS | 365 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele44g0018 | 365 | MobiDBLite | consensus disorder prediction | 27 | 50 | - | - | |
Lele44g0018 | 365 | Gene3D | - | 150 | 365 | IPR015943 | GO:0005515 | |
Lele44g0018 | 365 | PANTHER | - | 42 | 359 | IPR044715 | - | |
Lele44g0018 | 365 | SMART | c3hfinal6 | 51 | 77 | IPR000571 | GO:0046872 | |
Lele44g0018 | 365 | ProSitePatterns | Trp-Asp (WD) repeats signature. | 232 | 246 | IPR019775 | - | |
Lele44g0018 | 365 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 214 | 254 | IPR001680 | GO:0005515 | |
Lele44g0018 | 365 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 214 | 248 | - | - | |
Lele44g0018 | 365 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 89 | 121 | - | - | |
Lele44g0018 | 365 | Pfam | Zinc finger domain | 57 | 75 | - | - | |
Lele44g0018 | 365 | Pfam | Nucleoporin Nup120/160 | 97 | 134 | - | - | |
Lele44g0018 | 365 | Gene3D | - | 28 | 76 | - | - | |
Lele44g0018 | 365 | Pfam | WD domain, G-beta repeat | 209 | 245 | IPR001680 | GO:0005515 | |
Lele44g0018 | 365 | Pfam | WD domain, G-beta repeat | 250 | 282 | IPR001680 | GO:0005515 | |
Lele44g0018 | 365 | ProSiteProfiles | Zinc finger C3H1-type profile. | 51 | 78 | IPR000571 | GO:0046872 | |
Lele44g0018 | 365 | Gene3D | - | 77 | 149 | IPR015943 | GO:0005515 | |
Lele44g0018 | 365 | SUPERFAMILY | WD40 repeat-like | 73 | 354 | IPR036322 | GO:0005515 | |
Lele44g0018 | 365 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 89 | 130 | IPR001680 | GO:0005515 | |
Lele44g0018 | 365 | PRINTS | G protein beta WD-40 repeat signature | 186 | 200 | IPR020472 | - | |
Lele44g0018 | 365 | PRINTS | G protein beta WD-40 repeat signature | 108 | 122 | IPR020472 | - | |
Lele44g0018 | 365 | PRINTS | G protein beta WD-40 repeat signature | 232 | 246 | IPR020472 | - | |
Lele44g0018 | 365 | SUPERFAMILY | CCCH zinc finger | 53 | 76 | IPR036855 | GO:0046872 | |
Lele44g0018 | 365 | SMART | WD40_4 | 248 | 285 | IPR001680 | GO:0005515 | |
Lele44g0018 | 365 | SMART | WD40_4 | 207 | 245 | IPR001680 | GO:0005515 | |
Lele44g0018 | 365 | SMART | WD40_4 | 82 | 121 | IPR001680 | GO:0005515 | |
Lele44g0018 | 365 | SMART | WD40_4 | 162 | 199 | IPR001680 | GO:0005515 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele44g0018 | Lele-ChrLele44 | 107648 | 109414 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele44g0018 | 105 | 262 | Eukaryotic Initiation Factors Gene Family | AT2G46290 | 29.379 | 1.68e-09 | 57.0 |