Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g0015 ATGTTGGGCTCAAACACCAATTTGGTGACCACGGTGATTGGATTTGGTATGAGTGCGACTTTTATTGTGTTTGTCTGTACAAGAATAATCTGTGCAAGATTGCGAGGGTCCTCGGAATCTCATAATATGTATGAATATGAACCTAGGATGGATATAGAACAGCCAGAACATCTTATTAACGGCCTAGAACCTGTTCTTGTTACTGCAATTCCTACCATGAAGTTCAACCAAGAGGCTTTCAGTTCTATTGAAAATACAGAGTGTGTGATATGTTTGGCAGAGTACAAAGAAAGAGAGGTACTGCGCATCATGCCAAAATGTGGTCATAGCTTCCATCTTTCTTGCATTGATATATGGCTGAGGAAACAATCCACCTGCCCTGTATGCCGTCTTCCATTGCAGAATTCTTCTGAAGCAAAGCATATGAGACCAGTAACGTTTAGCTTAGGGCAAGGTGAGTCTCAGACTTCTGAAAGTAGAGACAGTGAGAGGAATACGGATCCCGTGCCGGGGAATCCCTTGCCCTTACAGCAATCAGATACTGCAGAAGCAGAAACAAGGCAATGA 567 0.4303 MLGSNTNLVTTVIGFGMSATFIVFVCTRIICARLRGSSESHNMYEYEPRMDIEQPEHLINGLEPVLVTAIPTMKFNQEAFSSIENTECVICLAEYKEREVLRIMPKCGHSFHLSCIDIWLRKQSTCPVCRLPLQNSSEAKHMRPVTFSLGQGESQTSESRDSERNTDPVPGNPLPLQQSDTAEAETRQ 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g0015 188 SUPERFAMILY RING/U-box 78 135 - -
Lele44g0015 188 CDD RING-H2_PA-TM-RING 87 130 - -
Lele44g0015 188 ProSiteProfiles Zinc finger RING-type profile. 88 130 IPR001841 -
Lele44g0015 188 SMART ring_2 88 129 IPR001841 -
Lele44g0015 188 MobiDBLite consensus disorder prediction 142 188 - -
Lele44g0015 188 MobiDBLite consensus disorder prediction 171 188 - -
Lele44g0015 188 PANTHER OS11G0150450 PROTEIN 1 167 - -
Lele44g0015 188 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 65 140 IPR013083 -
Lele44g0015 188 Pfam Ring finger domain 87 130 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g0015 Lele-ChrLele44 96687 98295 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g0015 8 133 C3H Transcription Factor Family AT1G72220 32.824 1.37e-20 86.3