Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g0014 ATGGCAGGAGCTGGGACTAAGAAATCCGCTTCTGCAACTGCGTCGCCTTCATCATCAGATGCACAACCCAACAACAAGGCCACGATGATCAAACGGTTCATAGGGGTTCGCCAGAGGCCGTCCGGACGATGGGTCGCCGAGATCAAGGACTCGTCTCAGCATGTCCGGCTATGGCTCGGAACCTACGACACCCCAGAGGAGGCGGCCCAAGCCTACGACGAGGCAGCCCGAGCCCTCCGTGGCGACACAGCCCGAACCAACTTCGTCTCCTCCTCCGCCACCACCACCAACGAAGGCCTATCGAAGCAGAGTGGACTGAGTTTTGCTTCTCTAAAAGCCAAGCTGAGCAGGAATCTTCAGAGCATAATGGCTAGGGCAAGCGACGGCAGCAGCAGTAATAAAGCATCCAAGAACAGGGTAACTGACCATTTTACCCTAGCGAGCATATTCCATAGAAGGCCTGGTTCTAACTACGGACAGTACCAGCTCAACCAGATCCCTAGTGATACGGCGGAGAACGTTGTGCAGCCTAGTATAATAGTGCCGCCTGTCGGGGATCAACCTGCGGGTGCAATTAGTTCCTGGGAGAGCTCGAGCGTATCAGATTGCAGCTCCGAGTGGGTGGGGTTCCGGCAACCTGGTTTGGACTCGGACGTATCAGATGCCGGCGGGGAGCAGTTAGGGCTTAATCTGGAGCAGCTGTTGGGGTGGGTGGATAGTCCGGATCATGGGTACGGAAGTAGATTAATAAATGGAAGCGATGGACAAGATGAAGGGTCAAGGAGCAAGAGGTTTAAGTTATCTTCTTCAGTTCTGGTGCCTCCAAATTTCAGTGGGCCTCCGAATAACAATGATTTTGGGTCTCCTTACAGTGCTTATGGATCTCCGTACACTAATATTGGCGGCAAGTGA 912 0.5373 MAGAGTKKSASATASPSSSDAQPNNKATMIKRFIGVRQRPSGRWVAEIKDSSQHVRLWLGTYDTPEEAAQAYDEAARALRGDTARTNFVSSSATTTNEGLSKQSGLSFASLKAKLSRNLQSIMARASDGSSSNKASKNRVTDHFTLASIFHRRPGSNYGQYQLNQIPSDTAENVVQPSIIVPPVGDQPAGAISSWESSSVSDCSSEWVGFRQPGLDSDVSDAGGEQLGLNLEQLLGWVDSPDHGYGSRLINGSDGQDEGSRSKRFKLSSSVLVPPNFSGPPNNNDFGSPYSAYGSPYTNIGGK 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g0014 303 FunFam ethylene-responsive transcription factor RAP2-11 31 90 - -
Lele44g0014 303 SUPERFAMILY DNA-binding domain 32 89 IPR016177 GO:0003677
Lele44g0014 303 PRINTS Ethylene responsive element binding protein signature 33 44 IPR001471 GO:0003700|GO:0006355
Lele44g0014 303 PRINTS Ethylene responsive element binding protein signature 55 71 IPR001471 GO:0003700|GO:0006355
Lele44g0014 303 MobiDBLite consensus disorder prediction 272 303 - -
Lele44g0014 303 MobiDBLite consensus disorder prediction 1 28 - -
Lele44g0014 303 Gene3D AP2/ERF domain 31 90 IPR036955 GO:0003700|GO:0006355
Lele44g0014 303 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 9 140 - -
Lele44g0014 303 MobiDBLite consensus disorder prediction 8 26 - -
Lele44g0014 303 CDD AP2 31 88 IPR001471 GO:0003700|GO:0006355
Lele44g0014 303 ProSiteProfiles AP2/ERF domain profile. 32 89 IPR001471 GO:0003700|GO:0006355
Lele44g0014 303 Pfam AP2 domain 32 81 IPR001471 GO:0003700|GO:0006355
Lele44g0014 303 SMART rav1_2 32 95 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g0014 Lele-ChrLele44 86328 87239 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g0014 32 88 AP2-EREBP Transcription Factor Family AT5G19790 70.175 4.60e-24 96.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele44g0014 AP2 6.2e-15 CL0081