Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g0011 ATGCCTAACATTTCAAGGGTATTTTTGGAATTTGAGTTGAAATTTCCACCGACGGCTTCTTCCATGGACGGCATTGTTAATCCAATAGAAAGGACTCGGGGGACATCTCAGTTCGGGTTTCCTGATTCTTCGTCGCTAACAACAACCATGGTGGTTGAAGATAATAATCATGACGATGGTCGTTCAACAGAAGAATGGTTGATTCAAGCACAAGAGCTTGTCCCTCTTGCTCTTGAGAAGGCCAAGGAGGTGAAGAATTTCCCGGGAAGGTGGAAGATGATCATATCAAAACTCGAACAGATCCCGGACCGTTTATCGGACTTATCTAGCCATCCATGCTTCTCCAAGAACGCTCTTTGCAAGGAGCAATTGCAGGCCGTATCATCAATACTCAGAGAAGCCATTCATTTGGCTGAGCTTTGCGTGAAGAAGAAGTACGAAGGCAAGCTGAAGATGCAGAGTGATCTCGATGCCTTATCAGGAAAACTCGATTTGCACCTGAAAGATTGCAGCCTGCTGATCAAAACTGGAGTTCTTGGGGAGGCCACTTTGTCAGTAGCAATATCGTCAGAAGCTGATGTTTCGAGTAATATCAGGGAGTTACTGGCTCGCCTGCAGATCGGCCACTTGGAGGCGAAACACAGGGCTATAGAGAAACTGCACGATGTGATGAAAGAAGATGAGAAGAGTGTTGTAGCTGTTTTAACACGTAGCAACATAGCTGCTTTGGTTCAATTGCTCGCTGCTACTTCTCCAAGGATAAGGGAGAAAACTGTTTCCATTCTATGCAGTCTTGCAGAATCAGGAAGCTGTGAGAATTGGTTAGTTTCTGAAGGAGTGATTCCACCTCTGATAAGGCTCATTGAATCAGGAGGTGCCATCGCTAAAGAGAAGGCTACCATAACCTTTCAGAGGCTCTCCATGTCATCAGAAACTGCTCGTGCCATTGTTGGACATGGCGGGGTTCGTCCACTCATTGATCTCTGTCAGACTGGTGACTCTGTGTCCCAGGCTGCTTGTGCTTGTACCCTGAAGAACATATCTGCTGTCCCCGAGGTTCGACAAGTTCTTGCCGAGGAAGGGATTGTTAAGGTAATGATCAGTCTCCTAAACTGTGGGATGTTATTGAATTCCAAAGAGTATGCAGCTGAGTGCCTACAGAATCTCACTTCAAGCAATGAGAATCTAAGAAGGCTTGTCATAAGAGAAAATGGAATAAGAAGCCTTTTAGCTTATTTAGACGTTCCTCTTCCGCAAGAATCTTCAATGGAAGCCCTGAGGAACTTAGTAGGATCTGTCTCTGAGCAATCTCTAGTTTCCATGGGTCTGCTTCCTCGCTTGGCTCATGTCCTAAAATCCGGGTCCATCGGTGCCCAGCAAGCGGCTGCTTCTACAATCTGTAAAATTTGCAGCTCAGGAGAGATGAAGAAGATGATAGGTGAGGCTGGGTGCATGCCTCTGCTTGTGAAAATGCTGGAGGGCAAGTCTAATGGTGCTAGAGAGGTGGCTGCACAGGCGATTTCGAGCTTGATGATGCTGTCTCAGAATCAAAGAGAGGTGAAGAAGAATGACAAGAGCGTGCCTAATCTTGTTCAGTTGCTCGATCCAAATCCTCAAAACGCTGCGAAGAAATATGCAGTGGCATGCCTTGGATCGCTATCTTCGAGTCAAAAGTGTAGGAAACTGATGATCTCCTACGGAGCAATCGGCTATCTGAAGAAGCTGACTGAGATGGAGATTCAGGGAGCGAAGAAGCTGCTTGAGAGATTGGGAAGAGGGAAATTGAGAAGCTTGATTGAGATTGATGAGAAAAGTTTTCATGCCTTATTGCAACCAATCATGTTTGTTTATTGTGCCCCTATTAAGAGAAGTCCCGAAGGCCAGAGGCTAAGCCTTTCACGGAAACGTCCATGCTGCGTTTGTGATTATCGAGGCTATTTTATTGGACACTGCCTTCGGTACTCTCGCTTGCACACATCTTCCTTACGTGCGTTGTTTGATTCAGTAAAATACTAA 2016 0.4583 MPNISRVFLEFELKFPPTASSMDGIVNPIERTRGTSQFGFPDSSSLTTTMVVEDNNHDDGRSTEEWLIQAQELVPLALEKAKEVKNFPGRWKMIISKLEQIPDRLSDLSSHPCFSKNALCKEQLQAVSSILREAIHLAELCVKKKYEGKLKMQSDLDALSGKLDLHLKDCSLLIKTGVLGEATLSVAISSEADVSSNIRELLARLQIGHLEAKHRAIEKLHDVMKEDEKSVVAVLTRSNIAALVQLLAATSPRIREKTVSILCSLAESGSCENWLVSEGVIPPLIRLIESGGAIAKEKATITFQRLSMSSETARAIVGHGGVRPLIDLCQTGDSVSQAACACTLKNISAVPEVRQVLAEEGIVKVMISLLNCGMLLNSKEYAAECLQNLTSSNENLRRLVIRENGIRSLLAYLDVPLPQESSMEALRNLVGSVSEQSLVSMGLLPRLAHVLKSGSIGAQQAAASTICKICSSGEMKKMIGEAGCMPLLVKMLEGKSNGAREVAAQAISSLMMLSQNQREVKKNDKSVPNLVQLLDPNPQNAAKKYAVACLGSLSSSQKCRKLMISYGAIGYLKKLTEMEIQGAKKLLERLGRGKLRSLIEIDEKSFHALLQPIMFVYCAPIKRSPEGQRLSLSRKRPCCVCDYRGYFIGHCLRYSRLHTSSLRALFDSVKY 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g0011 671 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 279 321 IPR000225 GO:0005515
Lele44g0011 671 SUPERFAMILY ARM repeat 195 580 IPR016024 -
Lele44g0011 671 Pfam Armadillo/beta-catenin-like repeat 474 510 IPR000225 GO:0005515
Lele44g0011 671 Pfam Armadillo/beta-catenin-like repeat 310 349 IPR000225 GO:0005515
Lele44g0011 671 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 54 599 - -
Lele44g0011 671 Gene3D - 170 436 IPR011989 -
Lele44g0011 671 Gene3D - 437 587 IPR011989 -
Lele44g0011 671 SMART arm_5 227 267 IPR000225 GO:0005515
Lele44g0011 671 SMART arm_5 472 512 IPR000225 GO:0005515
Lele44g0011 671 SMART arm_5 432 471 IPR000225 GO:0005515
Lele44g0011 671 SMART arm_5 513 555 IPR000225 GO:0005515
Lele44g0011 671 SMART arm_5 392 431 IPR000225 GO:0005515
Lele44g0011 671 SMART arm_5 309 349 IPR000225 GO:0005515
Lele44g0011 671 SMART arm_5 350 391 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g0011 Lele-ChrLele44 66278 70805 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g0011 352 578 U-box Gene Family AT2G23140 28.448 3.80e-09 57.8