Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g1349 ATGAATGGTAAAGCTTGGAATTGGGCTATAGGATTGACGTATATAGTATCTGTGGCAGCAATTTGGATTGCTGCTAGCTTCGTAGTTCAGTCTGTTGTAGATGCTGGGGTATCACCATTCCTTATCACATACATCTGCAATTCATTGTTTGTGGTGTACATTCCGATTATTGAGATTGGACGATATTTGGAGGATTCTTATGGGAGTTTATGGTTTTGGAGGAGTGAGGAGGAAAGTAACGATTTGGAAGTGCTAGGGGAATCAGAGCAGGCTATTCTTCTCGAAGACAATGGTGCCAGTAACGAAGCCCGTTTATCCTTGCCTGATGAAGAGACTGTCAGTCAGAAGAGGAATAGTAGTGAAGGGGCATTGCCCGATCAAGGTAGTCTGACTGATGATCTTAAGAATCAACTGGATGCAAAAGGGCGTTGGACACGATACAGGGTCGCTAAAGTTAGCCTATTGATATGCCCGTTTTGGTTCTTTGCCCAACTCACTTTTAACCTCTCGCTGAAGTATACTACGGTCACATCGAATACTATCTTAAGCAGCGCGTCCAGTCTCTTTACATTCTTGGTCTCTCTAGCAATTTTGGGTGAGAAATTCACTTGGATAAAGCTCTTTAGTGTTCTTCTTTGCATGGGAGGAACAATAATTGTAAGTCTTGGTGATTCACAAAGTGGTTCAAGCACAATTGCTTCAAATCCTTTACTCGGAGACATTCTCGCTCTTGTTTCAGCAGCTTTATATGCAGTTTATATCACCCTTATCCGGAAAAAACTGCCTGATGATGATGGAATGTCTGGCCGTGCCAGCATGGCTCAGTTTCTTGGATATCTTGGGCTTTTCAATCTTTTTATTTTTCTTCCTGTTGCCCTCGTATTAAATTTCACCAAGGTGGAACCATTTCATTCCCTCCCCTGGAAGCAGCTCGGCCTGATTATTGGTAAAGGATTGCTGGATAACGTGCTGAGTGATTACTTGTGGGCCAAGGCAGTTCTTCTAACATCAACCACGGTGGCTACGGCCGGACTTACGATTCAGGTGCCATTAGCAGCCATCGTGGACATTTTGACAGATCATGCACCTGGCCTGCTGGATTGCCTGGGAGCAGTGGCTGTGATGATTGGCTTTGCTGGAATCAATATTCCCTCAGATGCCTTCAAAAAATCAAGAGAAGTGAGCGTTGAGTTGGAAAACGAGGGTGTGAATTCCACAAGCCAACATTCAGAGTGGTTCAGGAGTGAAGGAAACATCAAGAGAAGCTGTAGAGATGGTGGTATCGGGGATCAGTCTGACCTCGATAATGACGTCAAGCTTACTGAGGTAGTTTAG 1335 0.4434 MNGKAWNWAIGLTYIVSVAAIWIAASFVVQSVVDAGVSPFLITYICNSLFVVYIPIIEIGRYLEDSYGSLWFWRSEEESNDLEVLGESEQAILLEDNGASNEARLSLPDEETVSQKRNSSEGALPDQGSLTDDLKNQLDAKGRWTRYRVAKVSLLICPFWFFAQLTFNLSLKYTTVTSNTILSSASSLFTFLVSLAILGEKFTWIKLFSVLLCMGGTIIVSLGDSQSGSSTIASNPLLGDILALVSAALYAVYITLIRKKLPDDDGMSGRASMAQFLGYLGLFNLFIFLPVALVLNFTKVEPFHSLPWKQLGLIIGKGLLDNVLSDYLWAKAVLLTSTTVATAGLTIQVPLAAIVDILTDHAPGLLDCLGAVAVMIGFAGINIPSDAFKKSREVSVELENEGVNSTSQHSEWFRSEGNIKRSCRDGGIGDQSDLDNDVKLTEVV 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g1349 444 Pfam Solute carrier family 35 170 300 IPR009262 GO:0016020|GO:0022857|GO:0055085
Lele43g1349 444 MobiDBLite consensus disorder prediction 117 132 - -
Lele43g1349 444 MobiDBLite consensus disorder prediction 109 132 - -
Lele43g1349 444 Gene3D - 137 227 - -
Lele43g1349 444 PANTHER SOLUTE CARRIER FAMILY 35, MEMBER F5 3 406 - -
Lele43g1349 444 SUPERFAMILY Multidrug resistance efflux transporter EmrE 141 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g1349 Lele-ChrLele43 21540711 21545113 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele41g0002 41 21510 26782 Lele43g1349 43 21540711 21545113 hybridization
Lele42g0006 42 48421 51399 Lele43g1349 43 21540711 21545113 hybridization