Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g1348 ATGCAAAAAACTGTGGCGGCAACAATAACATCGCGGCCGAAACTTTCACCTTTCGAGAATTGGCCGCCGCCACAAGGAACTTTCGGCGAAAATGCCTCATTGGTGAAGATTGTAGTACCAGTGAAGCAGCAGGACAGAAATGGATTGCAAGGGAATAGAGAGTTCCTTGTCGAAGTGTTGATGTTAAGCCTCTTACACCATGAAAATCTGGTGAATCTTATTGGATATTGCGCGGATGGAGATAAAAGATTATTGGTGTATGAGTACATGCCTCTGGGATCTGTAGAAGACCATCTTCTTGGTACGGGTTTCATGCGAAGCTGTCGGATTTTGGATTGGCCAAGCTCGGACCCACAGGAGACAAGTCTCATGTCTCCTGTGAGGAGTTACTGTGCTCCTGAGTATCAAAGAACTGGTCAGCTCACCGTCAAATCTGATGTCTATAGCGGGGTCGTTTTACTGGAACTCCTCACAGGAAAGCAAGTCATCGACAACACCAGACCCACCCCCAGCAAAATCTTGCTTCTTGGGTCTGCGCGACCCATATTCAAGGATCCTAATGGATACCTAGAGCTCGCCGATCCCCTTCTTCAAAGAAAGTTCCCCGTCAGAGATTTCAACCAAGCGGTGGCCGTGGCCGCCATGTGCCTTAACGACGAGCCCTCCGCTCGGCCTTTGATCAGCGACGGAGTTACCGCCCTTACTTTTCTCGGAACAGACCCCGACATCATTCCCCCGTCGTCACCACCGCAACAACATTCCCACCTTCTTCTTAATGACGCCGTTGCCGAACGTCAACGAGCCGTCGTTGAAGCCATACAATGGGGTTCAGCTTCCAGGAATAATGCTGTACACAGACCAAATGCTTCCTCTTTGTAA 879 0.4972 MQKTVAATITSRPKLSPFENWPPPQGTFGENASLVKIVVPVKQQDRNGLQGNREFLVEVLMLSLLHHENLVNLIGYCADGDKRLLVYEYMPLGSVEDHLLGTGFMRSCRILDWPSSDPQETSLMSPVRSYCAPEYQRTGQLTVKSDVYSGVVLLELLTGKQVIDNTRPTPSKILLLGSARPIFKDPNGYLELADPLLQRKFPVRDFNQAVAVAAMCLNDEPSARPLISDGVTALTFLGTDPDIIPPSSPPQQHSHLLLNDAVAERQRAVVEAIQWGSASRNNAVHRPNASSL 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g1348 292 SUPERFAMILY Protein kinase-like (PK-like) 34 260 IPR011009 -
Lele43g1348 292 PANTHER OS07G0668900 PROTEIN 128 241 - -
Lele43g1348 292 Gene3D Transferase(Phosphotransferase) domain 1 99 238 - -
Lele43g1348 292 Pfam Protein tyrosine and serine/threonine kinase 34 99 IPR001245 GO:0004672|GO:0006468
Lele43g1348 292 Gene3D Phosphorylase Kinase; domain 1 25 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g1348 Lele-ChrLele43 21537129 21538463 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g1348 25 290 Glycoside Hydrolase AT3G07070 49.394 3.88e-84 257
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Lele43g1348 PK_Tyr_Ser-Thr 9.3e-09 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele42g0007 42 67003 68634 Lele43g1348 43 21537129 21538463 hybridization