Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g1336 ATGGCCTCATCAAGCTTTTCTCTCTCTATGCTTTCGTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTGCTGCACTTTATCTCTCTCTTCTTCTTTTGCCTCATCTGACGTTGAAGTTCTCTTGGGGGAAATCAAAGCATCCTTACAGGGCAACCACCCCCAAAACATCATTTTGTCTTCTTGGAACTCCTCAGTGCCTCTTTGCCAATGGAGGGGTCTCAAACCCCCATCTTCATTTGCTCTTTCTTCAACTTCCTTCTGCTAATCTCTATGGTTCCATCCCCCGAGAGCTTTCTGAGTTCCCTATGCTTCAGAGCCTCTATCTCAACTTCAACTCGTTGAATGGAGCCATTCCTCTCGAACTTGGCTATAGTTCCTCCCCCTCCGACATCGATTTGCGTGAAAACTTTCTCAGTGGAGCTTTACCTCCATCCATCTGGAATATGTGCCACAGGCTTGTTTCTCTCAGACTCCGTGGAAATTTACTTTCTGGGTCTATTCCAGAACCAGCATTGCCAAATTGTTCTTGTGAGAATTTGCGATTCCTTGATTTTGGCAGGAACAACTTCTCTGGGAATTTCCCAGACTTCATTACTCGTTTTGGCGGGTTGAAACAGCTTGACTTGGGGGATAATATGTTGGTAGGTTCGATTCCTCAGACCTTAGAGGGGCTAAGGCTTGAGAAATTGAACCTCTCCCACAACAAATTTAGCGGGGTTTTGCCTACTTTTCTGGAAACCAAGTTTGGTCTGGAGGTTTTTGAAGGGAATAACCCAGGCTTATGTGGGCGACCCTTGAGAAGTTGTGGAGGAAATTCTAAGTCTAGACTAAGTTCCGGTGCTATCGCCGGCATAGTGATCAGTCTGATGGCAGGGAGTGTGGTTTTAGCTTCTTTGCTTATAGGTTATGTGCAAAACAAGAGGAGGAAGAGCAGGGGAGAGAGGGACGATGAATTGGAGGAAGAAGAGGACGAGGAAAATGGTGTTAATAGTAATGGTGAGGGCAAGCTTATGTTATTTCAAGGTGGTGAGAATTTGACGTTAGACGATGTGTTGAATGCAAATGGGCAAGTTCTGGAGAAGACATGTTATGGGACTGTGTATAAGGCAAAGCTTGCTGATGGAGGGACCATTGCGTTGAGGATGTTGAGAGAAGGTTGCTGCAGGGACAGGGCTTCGAGCTTGCCGGTTATAAAGCAACTGGCAAAAATTCGCCATGAGAATTTGATTCCTTTGAGAGCTTTCTATCAAGGAAAAAGAGGCGAGAATCTCCTTATTTTTTATTATCTACCTCTTACAACCCTGCATGATCTTCTACATGGCACTAGGAGGATAACTTCGGTTGTGAATTGTTCGCGAACAGGTACATGGGCAAATGCCTCTGCATTTCATTCTGATATTCGTTCCATAGGGCTTGCATATCTTCACACAGGACTTGATTCTCCAATTACTCAAGGAAGTGTGGGATCAAAGAACATTGTTGTGGACGATTTCTTTGGTGCCAGGCTCCCTGAGTTTGGGATTGATAAGCTATTGGTTCCAGCAGTAGCAGATGAGATGGTGGCACTTGCTAAGTCTGAGAGCTATAAGGCTCCGGAGCTTCAAAGGATGAATAAATGCAATTCAAGAAGTGACGTTTATGCATTTGGAATATTACTGTTGGAGATTTTGATAGGGAAGAAACCCGGAAAAACTGGGAGAGGAAGCGAGTATGTGGATCTGCCTTAA 1725 0.4464 MASSSFSLSMLSSSSSSSSSSSAALYLSLLLLPHLTLKFSWGKSKHPYRATTPKTSFCLLGTPQCLFANGGVSNPHLHLLFLQLPSANLYGSIPRELSEFPMLQSLYLNFNSLNGAIPLELGYSSSPSDIDLRENFLSGALPPSIWNMCHRLVSLRLRGNLLSGSIPEPALPNCSCENLRFLDFGRNNFSGNFPDFITRFGGLKQLDLGDNMLVGSIPQTLEGLRLEKLNLSHNKFSGVLPTFLETKFGLEVFEGNNPGLCGRPLRSCGGNSKSRLSSGAIAGIVISLMAGSVVLASLLIGYVQNKRRKSRGERDDELEEEEDEENGVNSNGEGKLMLFQGGENLTLDDVLNANGQVLEKTCYGTVYKAKLADGGTIALRMLREGCCRDRASSLPVIKQLAKIRHENLIPLRAFYQGKRGENLLIFYYLPLTTLHDLLHGTRRITSVVNCSRTGTWANASAFHSDIRSIGLAYLHTGLDSPITQGSVGSKNIVVDDFFGARLPEFGIDKLLVPAVADEMVALAKSESYKAPELQRMNKCNSRSDVYAFGILLLEILIGKKPGKTGRGSEYVDLP 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g1336 574 MobiDBLite consensus disorder prediction 310 334 - -
Lele43g1336 574 SUPERFAMILY Protein kinase-like (PK-like) 356 562 IPR011009 -
Lele43g1336 574 Pfam Protein tyrosine and serine/threonine kinase 355 563 IPR001245 GO:0004672|GO:0006468
Lele43g1336 574 Gene3D Ribonuclease Inhibitor 150 269 IPR032675 -
Lele43g1336 574 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 81 561 - -
Lele43g1336 574 Gene3D Phosphorylase Kinase; domain 1 348 428 - -
Lele43g1336 574 Gene3D Transferase(Phosphotransferase) domain 1 432 572 - -
Lele43g1336 574 ProSiteProfiles Protein kinase domain profile. 352 574 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele43g1336 574 Gene3D Ribonuclease Inhibitor 35 149 IPR032675 -
Lele43g1336 574 Pfam Leucine rich repeat 178 236 IPR001611 GO:0005515
Lele43g1336 574 SUPERFAMILY L domain-like 76 262 - -
Lele43g1336 574 FunFam Leucine-rich repeat receptor-like protein kinase 176 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g1336 Lele-ChrLele43 21425670 21428057 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g1336 87 574 Receptor kinase-like Gene Family AT3G24660 64.694 0.0 600
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lele43g1336 PK_Tyr_Ser-Thr 1e-14 CL0016