Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g1335 ATGGCTCCTAGATATGATTGCCAACAAAATGACAAGCTAGCAGCTCATGGAGGAGGAGTTCGCGATTCCTTCTCAGTCGAGGTTAAAACACTGGGCTCCATCCGACACAAGAACATCGTGAGGGACATCAAGGCCAACAACATTCTCATAGGTCCCAATTTTGAGCCATACATTGCCGATTTCGGGCTCGCTAAACTCGTTGATGATGGAGATTTTGCAAGATCCTCTAGCACACTGGCCGGTTCCTATGGCTACATTGCTCCTGTGCTGTCAGGGAAGCAACCGATTGACCCAACGATACCAGATGGGCTCCACATTGTTGACTGGGTCAGACAGAAAAGAGGAGGGAGTGAAGTGCTGGACCCAAGCCTGTGTGCAAGGCCTGAACCTGAAATAGAAGAAATATTGCAGACATTGGGGGTGGCTCTGTTGTGCGTGAACCCTAGCCCAGAAGATAGGCCAGCCATGAAGGATGTAGCCGCAATGCTGAAAGAGATCAGGCAAGAAAGGGAGGAAGATATGAAAGTCGATGTGCTTCTTCATGGACCTTCTGCAAATGAACAAGATAATCATTCAAGTGAAGAGCCAAGAGGGAATGTGACGAAGCACTCGTACCCAATAAACAGCAACAACACTAGTTTTTCTGCCTCTCTTCTTGTCTTACTTTCATCCTCCAATACCAAAGTCACATTCAAATAG 699 0.4735 MAPRYDCQQNDKLAAHGGGVRDSFSVEVKTLGSIRHKNIVRDIKANNILIGPNFEPYIADFGLAKLVDDGDFARSSSTLAGSYGYIAPVLSGKQPIDPTIPDGLHIVDWVRQKRGGSEVLDPSLCARPEPEIEEILQTLGVALLCVNPSPEDRPAMKDVAAMLKEIRQEREEDMKVDVLLHGPSANEQDNHSSEEPRGNVTKHSYPINSNNTSFSASLLVLLSSSNTKVTFK 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g1335 232 ProSiteProfiles Protein kinase domain profile. 1 232 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele43g1335 232 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 90 201 - -
Lele43g1335 232 SUPERFAMILY Protein kinase-like (PK-like) 22 188 IPR011009 -
Lele43g1335 232 Gene3D Transferase(Phosphotransferase) domain 1 94 183 - -
Lele43g1335 232 Gene3D Transferase(Phosphotransferase) domain 1 27 93 - -
Lele43g1335 232 MobiDBLite consensus disorder prediction 182 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g1335 Lele-ChrLele43 21416637 21417682 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g1335 42 217 Receptor kinase-like Gene Family AT5G56040 40.952 1.39e-37 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele43g1335 None None None