Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g1333 ATGGTTTTTTCTTCCATGCATCCTTATCTTGATCCAGCCAACTGGCCGCAGCAACAGCCGAGTCATCAGATTGGAAGTAGCAGTGGCCCGGGTTCTCAGCTTCTTCCTCCTCCGCCACCGCCACTGCCACCTTCTCAGTCTCATGGAGCTAGTGGCTCCGGTTCCATCCGGCCTGGTTCCATGGCTGATAGGGCTCGGATGGCCAACATACCGATGCCGGAGGCGGCGCTCAAATGCCCTCGCTGCGATTCCACCAATACTAAGTTCTGCTACTTCAACAACTACAGCCTCTCTCAGCCTCGCCACTTCTGCAAGACCTGTAGAAGGTACTGGACCCAGGGTGGGGCCCTGCGAAATGTCCCTGTCGGCGGGGGATGTCGGAGGAACAAGAGAAGTAAAGGAAGCAGCTCAAAGTCGCCGCCGGTGAGCTCAGATCGCCAGACAGGCAGTGCTACTTCAAACAACTCTGTGTCTTCCAACAGTGCTTCTGCCGCTGATATGGTAGGCCTTTCGCCTCAGCTTCCATCATCGCTGAGGTTCTCGGCTCCTACTTGGCATCAACTCACTGAGTTTGGATCCGGAGAGATGGGATTGAGTAACTATGGTTTGAGTAATCAAATGGGAGGAGTTGGTGACTTAAGTTTCCATATAGGAACCGCTTTGACCGGTGGAGCAAGCGGCAGCGGTAGCTCCATCTTATCCGCCTCCGGGTTAGAGCAGTGGCGGATGTCACAAACACAACAATTTCCCTTCTTGACTGGTTTGGAAGCTTCGCCTGATTTGTACCAATTTCAAAGTGGAGCTGCAGGGCCGGGATATGGCGGCGGCGCAAGTCAGCTCCGGCCAAAGGTGCCAAGTGGGGTGATAACTCAACTAGCTTCAGTGAAGATGGAAGACCGTCATAATCATCGCCAGGAGCTAAATTTGTCAAGGCACTTCTTGGGGATGAATAGTAATTCAACAAATCATGAGCAGTATTGGAATACTACAGCCGGTAATTCTTATACTACTGCTAATTGGACTGAGCTTTCTGGGTTTCGCTCTTCTTCCACTACTAGCAACAATCCACCATAG 1074 0.5214 MVFSSMHPYLDPANWPQQQPSHQIGSSSGPGSQLLPPPPPPLPPSQSHGASGSGSIRPGSMADRARMANIPMPEAALKCPRCDSTNTKFCYFNNYSLSQPRHFCKTCRRYWTQGGALRNVPVGGGCRRNKRSKGSSSKSPPVSSDRQTGSATSNNSVSSNSASAADMVGLSPQLPSSLRFSAPTWHQLTEFGSGEMGLSNYGLSNQMGGVGDLSFHIGTALTGGASGSGSSILSASGLEQWRMSQTQQFPFLTGLEASPDLYQFQSGAAGPGYGGGASQLRPKVPSGVITQLASVKMEDRHNHRQELNLSRHFLGMNSNSTNHEQYWNTTAGNSYTTANWTELSGFRSSSTTSNNPP 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g1333 357 ProSiteProfiles Zinc finger Dof-type profile. 77 131 IPR003851 GO:0003677|GO:0006355
Lele43g1333 357 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 60 251 IPR045174 GO:0003700|GO:0006355
Lele43g1333 357 ProSitePatterns Zinc finger Dof-type signature. 79 115 IPR003851 GO:0003677|GO:0006355
Lele43g1333 357 MobiDBLite consensus disorder prediction 11 60 - -
Lele43g1333 357 MobiDBLite consensus disorder prediction 32 46 - -
Lele43g1333 357 MobiDBLite consensus disorder prediction 11 31 - -
Lele43g1333 357 Pfam Dof domain, zinc finger 76 131 IPR003851 GO:0003677|GO:0006355
Lele43g1333 357 MobiDBLite consensus disorder prediction 118 164 - -
Lele43g1333 357 MobiDBLite consensus disorder prediction 135 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g1333 Lele-ChrLele43 21400047 21401296 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g1333 1 299 C2C2-Dof Transcription Factor Family AT2G37590 40.248 1.94e-56 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lele43g1333 zf-Dof 6e-33 No_clan