Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g1326 ATGGCTAATCCCCATCTTCGCCCTCTACCACGGTGGCGCAAGTGGGCCAAGAAGGACTGGGCAATAGCCGCTCTGGGCTTCACTCTCGCTGTCGTCTTTGCACTTACTCTCATCTCCGATTCCCGACGAAGCTCATTTGGTCTGAGCCAAAAAGATGATCTTGTCGATCTGACCCTTCTTCGAAATGCCAAGGATAGAGGCGCTTTTTGCTTGGACGGGAGCTTGCCGGGATACCATTTCCAAAAGGGCTTTGGATCCGGCTCTGACAGTTGGCTACTTCACATTGAGGGAGGAGGTTGGTGTAATACGGTTTCTTCGTGTTCTCGGCGAAAAATGACTGCTTTGGGATCCTCAAAGTATATGGATAGACAAGTTCGATTCTCGGGAATCTTTAGCTCTGACCCTGCTCAGAATCCTGATTTCTTTAGCTGGAACAAGGTTAAGATACGCTATTGTGATGGTGCGTCCCTTGCTGGTCACCCAGAACACGAGATTAAGAGAGGAAATAAATTATTCTTCAGAGGTCAGCTCATATGGGAAGCACTGATGGATGAACTCTTGTCAATTGGCTTGTCTGAAGCCAAAGAGGCTCTGCTTTCAGGATGCTCTGCTGGAGGATTGGCAACTCTTATACATTGTGATGACTTTCGAGGGCATCTTCCAAAGGAAGCAACTGTCAAGTGTCTTGCTGATGCAGGCTTCTTCCTTGAAGAGAAGGATGTTCTTGGCAACGACACCATCAGATCCTTTTATCATGATGTTGTCCAGCTTCAGAGTGTTATTAAGAGCTTGCACAGGGACTGCACTTCTAGTTTGGAACCATCTGGGTGTTTCTTTCCAGCCAAAATCATGAAAAGGCTACAGACTCCTGTGTTCCTTGTCCAGCCAGCTTATGATTTCTGGCAGATACAAAATGTTCTGGTGCCAGATGGGTCAGATCCTCAAGGCCACTGGAAAAGATGCAGACTGAGCATTCACAATTGTGATGCTGATCTGATGGATACTCTTCAAGGTTTCCGAAATTCTTTGCTGAAGTCTTTGAATGAATTCCACCATCAAAAGGAAGTGGGACTGTTTATAAATTCCTGTTTTGTTCATTGCCAGACTTGGATGTCGGAGACATGGCATTCAGCCAGTTCTCCTAAAATAAACAATAAGACCATAGCTGAAGCTGTTGGTGACTGGTATTTTGGCAGAGAAGTGGTGAAGCAAATCGACTGCCCTTATCCGTGCAACCCCACTTGCCATAATATGGATTTCACTGCACATGATCTTGGGCTTTATATCGAAATGGAGCTAGAGAAGATGATGTGGACAGTTGATGATACTCGAACGCATGAAATGGAATCACCTCTACTCTTTCATGCAGCTTGGAGTTTCAATGAAGCAGAAATCGTGGACTGTGTGGACTTCACATTTCTTACAAACGGCTCAGACATTGAAGTATGGGATTTTGGAATGTAA 1464 0.4549 MANPHLRPLPRWRKWAKKDWAIAALGFTLAVVFALTLISDSRRSSFGLSQKDDLVDLTLLRNAKDRGAFCLDGSLPGYHFQKGFGSGSDSWLLHIEGGGWCNTVSSCSRRKMTALGSSKYMDRQVRFSGIFSSDPAQNPDFFSWNKVKIRYCDGASLAGHPEHEIKRGNKLFFRGQLIWEALMDELLSIGLSEAKEALLSGCSAGGLATLIHCDDFRGHLPKEATVKCLADAGFFLEEKDVLGNDTIRSFYHDVVQLQSVIKSLHRDCTSSLEPSGCFFPAKIMKRLQTPVFLVQPAYDFWQIQNVLVPDGSDPQGHWKRCRLSIHNCDADLMDTLQGFRNSLLKSLNEFHHQKEVGLFINSCFVHCQTWMSETWHSASSPKINNKTIAEAVGDWYFGREVVKQIDCPYPCNPTCHNMDFTAHDLGLYIEMELEKMMWTVDDTRTHEMESPLLFHAAWSFNEAEIVDCVDFTFLTNGSDIEVWDFGM 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g1326 487 PANTHER NOTUM-RELATED 35 418 IPR004963 GO:0016787
Lele43g1326 487 Pfam Pectinacetylesterase 49 400 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g1326 Lele-ChrLele43 21352686 21358183 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g1326 1 387 Carbohydrate Esterase AT3G09410 59.645 4.23e-178 503