Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g1325 ATGGGTAACGGGATTGGAAAAATCTGCCTCTGCTCCTCCGGTGTCGGAGATATCTCCCGCCGTTACGAGATGTTTCCCTCCAATTCCCACGAAAGGTCTCTCGGAAATTCAATCTGCTACACTCGACCCGACCCATTTCGATTATCGTCCTCCTCCAATATTTTCTCCGACGAGGATTCCACCACGCAGATGACTTTCAGATCAATCTCCGGCGCCTCCGTGAGCGCCAACTCTTCCACCCCGCCTTCCATATATCTTGCCAATTCCTCCCAACACGGAGGTTCTGCTTTTGACGCGACGGCCTCGTTTGAGTCCTCTACTTCCTTCACCTCCATGCCCCTTCATTATCATCAGCCCCGTGGCTCCTCCGTTGGCAGCTCCGGCACGGTGTCGAGTCCCTTGGACAGCAGGTTCTCTTATTCGGGTTCGGGTCCTATAGTGAGGATTGAGCCGAGATTGAATGGGGGCGCCATTGAAGAACAGCGAGAATGCTCTGAATCATTGAAATTCAAAAGGAGCTTATCTGATCACAAAATTGGGTCTTTGATGAAACCCAGTAAAAGTTTGAAGAAGATTTTTCGGCGAGCGATTTCCAGCGTCACGCCGATTAAAGGGGTGGCTTCGGTCGGAGAGTCCACTTCAGGGAAGAAAAGAAACGATGATGAAGACGAGGTCGAAAATGATGAAGGTTATGCAGTGCAAAGTATGAATTTTCAGTGGGCTCAAGGAAGAGCAGGGGAAGATAGAATTCATATCGTGATTTCAGAGGATGATGATTGGGTTTTCGTTGGAATTTATGATGGATTTAACGGCCCAGATGCCACTGATTATCTTCTAAACAATCTCTTCTGGTCTGTTCATACTGAGTTGAAGGAGCTCCTCGGTAATGGCAATTCAGAATCAACAAATGAAGACTGTCTGAGTCATTCTGATGTGCTAAGAGCACTTTCGGAGGCATTAAGGAAAGCAGAGGACGAATTTCTGAAGGATTCTGATGATACAATAACGAAGGATGCAGTGTTAGCTATGATGGGTTCTTGTGTATTGGTGGTGTTGATGAAAGGAGATGATGTTTACGTAATGAATGTTGGGGACAGTCGAGCAGTTTTAGCTCAGAGTTCAGAGCATGGTTTAAATTCTCTTCAACTCACTGAAGATCACAGCACAAACGTGAAAGAGGAGGTTCAGAGAATCAGGAGGGAACACCCAGACGATCCTTCAGCAGTAATTAAAGGCAGAGTGAAAGGCCACTTGAATATCACTAGGGCTTTTGGGGCTGGTTTCCTCAAGCAGCCAAAATATAACAATGCAGTATTAGAGACATTCAGAGTGGACTATAAAGGGGATTCAGCTTACATCACATGTTCACCTTCACTTAAGCACCACACGCTGAGCCCTAGTGACAGATTCTTGATATTGTCCTCCGATGGACTTTACCAGTACTTCACCAATGAGGAGGCAGTCCACAGAGTTGAATTTTTCATCACTTTGTATCCGGAACGAGATCCTGCACAGCTTCTCATTGAAGAAGCTTTGTCCAGAGCAGCAACAAAAGCTGGCATGGATTTCTACGAGTTACTGGAAATCCCACAAGGAGAACGACGTTTATTTCATGACGATATTTCCATTGTCATAATCTCCTTGGAGGGCAAAATATGGCGCTCATCAGCTTCATCTACTCATTAA 1686 0.4597 MGNGIGKICLCSSGVGDISRRYEMFPSNSHERSLGNSICYTRPDPFRLSSSSNIFSDEDSTTQMTFRSISGASVSANSSTPPSIYLANSSQHGGSAFDATASFESSTSFTSMPLHYHQPRGSSVGSSGTVSSPLDSRFSYSGSGPIVRIEPRLNGGAIEEQRECSESLKFKRSLSDHKIGSLMKPSKSLKKIFRRAISSVTPIKGVASVGESTSGKKRNDDEDEVENDEGYAVQSMNFQWAQGRAGEDRIHIVISEDDDWVFVGIYDGFNGPDATDYLLNNLFWSVHTELKELLGNGNSESTNEDCLSHSDVLRALSEALRKAEDEFLKDSDDTITKDAVLAMMGSCVLVVLMKGDDVYVMNVGDSRAVLAQSSEHGLNSLQLTEDHSTNVKEEVQRIRREHPDDPSAVIKGRVKGHLNITRAFGAGFLKQPKYNNAVLETFRVDYKGDSAYITCSPSLKHHTLSPSDRFLILSSDGLYQYFTNEEAVHRVEFFITLYPERDPAQLLIEEALSRAATKAGMDFYELLEIPQGERRLFHDDISIVIISLEGKIWRSSASSTH 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g1325 561 Gene3D - 211 557 IPR036457 -
Lele43g1325 561 Coils Coil 381 401 - -
Lele43g1325 561 SUPERFAMILY PP2C-like 244 549 IPR036457 -
Lele43g1325 561 CDD PP2Cc 245 548 IPR001932 -
Lele43g1325 561 Pfam Protein phosphatase 2C 255 517 IPR001932 -
Lele43g1325 561 PANTHER PROTEIN PHOSPHATASE 2C 223 546 IPR015655 GO:0004722|GO:0006470
Lele43g1325 561 ProSiteProfiles PPM-type phosphatase domain profile. 230 548 IPR001932 -
Lele43g1325 561 SMART PP2C_4 229 546 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g1325 Lele-ChrLele43 21347313 21349432 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g1325 1 555 PP2C-type Phosphatase Gene Family AT2G28890 46.726 1.19e-175 509
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele43g1325 43 21347313 21349432 Lele43g1325 43 21347313 21349432 ECH
Lele41g0033 41 227632 229667 Lele43g1325 43 21347313 21349432 hybridization