Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g1322 ATGTCTCCCAGAGAGAGGTACTTCACTATTGGAAATTCACTATCTTTTCTCGATTTTGTTGTTTTTTGCTCGCCAAATTCAGCTCGCTTTCTTCTCATTTCTATCTCTGTGTTTGATCGAGTCTTCACGCAAGATATGGCTGAATTGAAATCAGAAGAGTGTTGCCTAGAGAATAAGCAATCTACTGCGGCCTCGACCTCCTCTATCTCTGAAGGCAGTACCAGTGCTATACACAAGTCCCCTGGAAGATGTAGTCCAGCATCAACGTCACGCTCCCATCGGAGGACCACTGGTCCCATCAGGCGTGCAAAGGGCGGTTGGACAGCCCAGGAGGATGAGACATTGAGGAATGCTGTTGCAGCTTTCAAGGGCAAGAGTTGGAAGAAAATAGCTGAATATTTTCCTGATAGATCAGAAGTGCAATGTCTGCACAGATGGCAAAAGGTTCTTAATCCTGAACTTGTTAAAGGCCCTTGGACTCCTGAGGAGGATGACAAAATTGTTGAACTGGTATCAAAGTATGGGCCAGCAAAATGGTCTATGATAGCTAAATCGTTGCCTGGTCGCATCGGGAAACAGTGTCGAGAGCGATGGCACAATCATCTTAATCCTGAAATAAAGAAAGAGGCCTGGACTTTGGAGGAAGAACTGGCCCTCATGAATGCTCATCGCATACATGGGAACAAGTGGGCTGAAATAGCTAAGGTTTTGCCCGGAAGGACTGATAATGCAATAAAGAACCACTGGAATAGTTCATTGAAGAAAAAATTAGAATTTTATTTAGCTACAGGAAACCTTCCACCAATCCAAAAGAGCAGTGCACAAGGTGGTGTGAAAGATACAATAAGACGCTCTGCTAGTAAAACCGTACATGCTTGCTCAAATAAAGTTTCAGATACAGCTGCTGATACATCATCAGACAATACTAAAGATGGCAATGGAAAGAATCAACTAGAGTCCTTGGCAACAGTGAGAGAGTTTGGTAATACTCTGAGCGTTCCTGCAAATGAAGGTGCTGATTCTGATTTTGTAGAATGGAAGCCCAGATCATCCAATCTAGATCTCAGCTACAGCAACTCAGAACCAGTGTCAAGGGATAATTTTGGATTGACCAGTGACCTAAAATTTGATGACGCTGGACTGAATGGCAAGCATAAAGTTGGGAATTTTGTGAATAATGGTGAAATGAGCAGTAGCAGGCTAATTAATACATCTTTTTCAGTGCATAGTCCAGCCTCTGGTTCTTTGTGTTATGAACCTCCATTGTTGGAGAGCACGGTTCCTTTAGATTCCATTTATTTAAATATGTATTGCCTGCAGAACGAGTACAATACTACTGCAGTGACGTCACCTGTTGGTTTCTTCACTCCAACTTGTGTGAAGGGCAGTGAATTATGCGGAGAGACTCCTGAATCAATATTGAAAATGGCTGCTAAAACTTTCCCATATACTCCTTCCATATTGAGGAAGAGAAAGAATAGAATCCAAGCACATGTAACTCCTTGTAAAGTTGTGAAAGTGGATGATGGATTTCATACTCCTAATGAACAGGAGGAAACCAAGTATAATGATGGTTCTGGATATGGAGAGCTCTGTGAGAGTCCGGCAAGGGATGACAGTCTACATAACCAGGCTTTCAATGCTTCTCCCCCTTACCGGTTAAGATTCAAGCGAAAAGCATTTGTCAAGTCTGTGGAGAAACAACTTGAGTTTGCTTTTGATCAAGAGAAGCATGATGGAAACAAAATGGAAAAATCTGCTAGGAGCACTGCGATGGCTGGAGATTGTTTGCCTGAAACAAAAGTGGAAGTGACGTAG 1818 0.4263 MSPRERYFTIGNSLSFLDFVVFCSPNSARFLLISISVFDRVFTQDMAELKSEECCLENKQSTAASTSSISEGSTSAIHKSPGRCSPASTSRSHRRTTGPIRRAKGGWTAQEDETLRNAVAAFKGKSWKKIAEYFPDRSEVQCLHRWQKVLNPELVKGPWTPEEDDKIVELVSKYGPAKWSMIAKSLPGRIGKQCRERWHNHLNPEIKKEAWTLEEELALMNAHRIHGNKWAEIAKVLPGRTDNAIKNHWNSSLKKKLEFYLATGNLPPIQKSSAQGGVKDTIRRSASKTVHACSNKVSDTAADTSSDNTKDGNGKNQLESLATVREFGNTLSVPANEGADSDFVEWKPRSSNLDLSYSNSEPVSRDNFGLTSDLKFDDAGLNGKHKVGNFVNNGEMSSSRLINTSFSVHSPASGSLCYEPPLLESTVPLDSIYLNMYCLQNEYNTTAVTSPVGFFTPTCVKGSELCGETPESILKMAAKTFPYTPSILRKRKNRIQAHVTPCKVVKVDDGFHTPNEQEETKYNDGSGYGELCESPARDDSLHNQAFNASPPYRLRFKRKAFVKSVEKQLEFAFDQEKHDGNKMEKSARSTAMAGDCLPETKVEVT 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g1322 605 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 151 206 IPR017930 -
Lele43g1322 605 SMART sant 207 255 IPR001005 -
Lele43g1322 605 SMART sant 155 204 IPR001005 -
Lele43g1322 605 SMART sant 103 152 IPR001005 -
Lele43g1322 605 MobiDBLite consensus disorder prediction 289 317 - -
Lele43g1322 605 ProSiteProfiles Myb-like domain profile. 151 202 IPR001005 -
Lele43g1322 605 PANTHER MYB PROTEIN-RELATED 104 187 - -
Lele43g1322 605 FunFam Transcriptional activator Myb isoform A 103 155 - -
Lele43g1322 605 FunFam Transcription factor MYB3R-2 209 272 - -
Lele43g1322 605 MobiDBLite consensus disorder prediction 66 100 - -
Lele43g1322 605 CDD SANT 210 253 IPR001005 -
Lele43g1322 605 Pfam Myb-like DNA-binding domain 208 251 IPR001005 -
Lele43g1322 605 Pfam Myb-like DNA-binding domain 156 202 IPR001005 -
Lele43g1322 605 Pfam Myb-like DNA-binding domain 104 150 IPR001005 -
Lele43g1322 605 CDD SANT 107 150 IPR001005 -
Lele43g1322 605 SUPERFAMILY Homeodomain-like 101 164 IPR009057 -
Lele43g1322 605 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 104 150 IPR017930 -
Lele43g1322 605 MobiDBLite consensus disorder prediction 578 605 - -
Lele43g1322 605 SUPERFAMILY Homeodomain-like 153 249 IPR009057 -
Lele43g1322 605 FunFam Transcriptional activator Myb isoform A 156 208 - -
Lele43g1322 605 ProSiteProfiles Myb-like domain profile. 99 150 IPR001005 -
Lele43g1322 605 Gene3D - 155 208 - -
Lele43g1322 605 Gene3D - 103 154 - -
Lele43g1322 605 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 207 257 IPR017930 -
Lele43g1322 605 MobiDBLite consensus disorder prediction 66 94 - -
Lele43g1322 605 CDD SANT 158 202 IPR001005 -
Lele43g1322 605 Gene3D - 209 279 - -
Lele43g1322 605 ProSiteProfiles Myb-like domain profile. 203 253 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g1322 Lele-ChrLele43 21327368 21332599 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g1322 14 595 MYB Transcription Factor Family AT3G09370 46.128 1.12e-151 445
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele43g1322 Myb_DNA-binding 3e-14 CL0123